RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 IGLV1-44P01699 117 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 IGHV1-46P01743 117 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 RD3LP0DJH9 198 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 ZNF787Q6DD87 383 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 DTD1Q8TEA8 209 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 R3HDM4Q96D70 268 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 SLC35B3Q9H1N7 401 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 ARV1Q9H2C2 271 aa9.89□□□□□ -0.83
PTPRN-204ENST00000423636 MBD3L4A6NDZ8 208 aaPredicted RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 MBD3L3A6NE82 208 aaPredicted RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 MBD3L5A6NJ08 208 aaPredicted RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 COLCA2A8K830 154 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 MKRN2OSH3BPM6 223 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 HSPB1P04792 205 aaKnown RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 CD40P25942 277 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 TAGLN2P37802 199 aaKnown RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 MDH2P40926 338 aaKnown RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 P2RY6Q15077 328 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 ACSM6Q6P461 480 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 MBD3L2Q8NHZ7 208 aaPredicted RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 SSX3Q99909 188 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 AGMATQ9BSE5 352 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 HES4Q9HCC6 221 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 A8MXE2 369 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 RRHO14718 337 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 OR4A8P0C604 315 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 FGF7P21781 194 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 TAS2R30P59541 319 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 LINC00596Q86U02 117 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 SPACA3Q8IXA5 215 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 RAB39BQ96DA2 213 aa9.88□□□□□ -0.83
PTPRN-204ENST00000423636 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
PTPRN-204ENST00000423636 RAI1Q7Z5J4 1906 aaPredicted RBP9.87□□□□□ -0.83
PTPRN-204ENST00000423636 DPRXA6NFQ7 191 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 TMEM210A6NLX4 147 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 ICAM4Q14773 271 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 MORN2Q502X0 79 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 HEYLQ9NQ87 328 aaPredicted RBP9.87□□□□□ -0.83
PTPRN-204ENST00000423636 CFAP46Q8IYW2 2715 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 LRRC30A6NM36 301 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 C15orf65H3BRN8 121 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 IGKV1-16P04430 117 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 KITLGP21583 273 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 TUBG1P23258 451 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 GATA2P23769 480 aaPredicted RBP9.87□□□□□ -0.83
PTPRN-204ENST00000423636 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
PTPRN-204ENST00000423636 LGALS4P56470 323 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 LYPD2Q6UXB3 125 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 ZNF429Q86V71 674 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 RPP25LQ8N5L8 163 aaKnown RBP9.87□□□□□ -0.83
PTPRN-204ENST00000423636 Q8NA96 180 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 FAM208BQ5VWN6 2430 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 SRRM5B3KS81 715 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 PRRG2O14669 202 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 DLK1P80370 383 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 RTP5Q14D33 572 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 NCMAPQ5T1S8 102 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 DHRS7BQ6IAN0 325 aaPredicted RBP9.87□□□□□ -0.83
PTPRN-204ENST00000423636 SLC35E4Q6ICL7 350 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 HIST1H2BAQ96A08 127 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 CALYQ9NYX4 217 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 PKD1L2Q7Z442 2459 aa9.87□□□□□ -0.83
PTPRN-204ENST00000423636 TGIF2-C20orf24A0A0A6YYL0 155 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 NQO2P16083 231 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 CT45A1Q5HYN5 189 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
PTPRN-204ENST00000423636 CT45A3Q8NHU0 189 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 LHX4Q969G2 390 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPRN-204ENST00000423636 TRBV6-6A0A0A6YYG2 114 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 SCAF4O95104 1147 aaKnown RBP9.86□□□□□ -0.83
PTPRN-204ENST00000423636 IFNA4P05014 189 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 CDSNQ15517 529 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 TIMM23BQ5SRD1 257 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 C19orf35Q6ZS72 473 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 OR51G1Q8NGK1 321 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 RAB40CQ96S21 281 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 PBDC1Q9BVG4 233 aa9.86□□□□□ -0.83
PTPRN-204ENST00000423636 A0A1W2PRD5 423 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 A0A1W2PRF3 423 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 A0A1W2PRM7 423 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 ACTL6BO94805 426 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 OR2C1O95371 312 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 CATR1Q13166 79 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 FFAR4Q5NUL3 377 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 AVPI1Q5T686 147 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 MOB1BQ7L9L4 216 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 SLC16A13Q7RTY0 426 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 WFIKKN1Q96NZ8 548 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 SLC39A9Q9NUM3 307 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 IGHV3-21A0A0B4J1V1 117 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 MAP1LC3B2A6NCE7 125 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
PTPRN-204ENST00000423636 DUTP33316 252 aaKnown RBP9.85□□□□□ -0.83
PTPRN-204ENST00000423636 C10orf91Q5T1B1 145 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 OR4A16Q8NH70 328 aa9.85□□□□□ -0.83
PTPRN-204ENST00000423636 TAF15Q92804 592 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTPRN-204ENST00000423636 MAP1LC3BQ9GZQ8 125 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms