RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 EXOSC1Q9Y3B2 195 aaKnown RBP12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 IGKV1-6A0A0C4DH72 117 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 IRGMA1A4Y4 181 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 PPP5D1E7EU14 171 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 SHOXO15266 292 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 OR2C1O95371 312 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 MYL12AP19105 171 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 PRSS8Q16651 343 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 C1orf100Q5SVJ3 147 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 PYDC1Q8WXC3 89 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 RDH8Q9NYR8 311 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 MLXQ9UH92 298 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 AK3Q9UIJ7 227 aa12.45□□□□□ -0.42
CHCHD3-202ENST00000423635 UBE2CO00762 179 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 MPPED1O15442 326 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 HLA-AP01891 365 aaKnown RBP12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 CD1AP06126 327 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 MAP2K4P45985 399 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 RASSF2P50749 326 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 UBE2KP61086 200 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 UNC119Q13432 240 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 TNXAQ16473 311 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 TM4SF20Q53R12 229 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 TMEM217Q8N7C4 229 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 CACNG8Q8WXS5 425 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 HDHD3Q9BSH5 251 aaPredicted RBP12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 SDHAF2Q9NX18 166 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
CHCHD3-202ENST00000423635 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 TMEM213A2RRL7 107 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 TMEM14DPA8MWL7 114 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 RRASP10301 218 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 APOC4P55056 127 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 QRFPP83859 136 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 CBX3Q13185 183 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 VMA21Q3ZAQ7 101 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 GLT8D1Q68CQ7 371 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 RNF183Q96D59 192 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 SELENOKQ9Y6D0 94 aa12.43□□□□□ -0.42
CHCHD3-202ENST00000423635 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 A8MWP6 167 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 OR2J3O76001 311 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 SCAF4O95104 1147 aaKnown RBP12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 CD37P11049 281 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 SRMP19623 302 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 TAS2R43P59537 309 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 RTL8BQ17RB0 113 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 UXS1Q8NBZ7 420 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 TMEM80Q96HE8 168 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 SPIN2AQ99865 258 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 SPIN2BQ9BPZ2 258 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 HSF4Q9ULV5 492 aa12.42□□□□□ -0.42
CHCHD3-202ENST00000423635 TRDCB7Z8K6 153 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 SOCS1O15524 211 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 MAPK3P27361 379 aaPredicted RBP12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 SERPINB10P48595 397 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 PRR20EP86478 221 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 PRR20CP86479 221 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 PRR20DP86480 221 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 PRR20BP86481 221 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 PRR20AP86496 221 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 MED21Q13503 144 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 DEFB135Q30KP9 77 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 FAM106AQ4KMX7 169 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 SLC25A42Q86VD7 318 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 FAM89BQ8N5H3 189 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 LPAR5Q9H1C0 372 aa12.41□□□□□ -0.42
CHCHD3-202ENST00000423635 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 PNMA8CA0A1B0GUJ8 204 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 FOXI3A8MTJ6 420 aaPredicted RBP12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 BPNT1O95861 308 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 C8orf88P0DMB2 117 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 TPBGQ13641 420 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 TTC23Q5W5X9 447 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 OR4A47Q6IF82 309 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 IDO2Q6ZQW0 420 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 LRRTM1Q86UE6 522 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 KIR2DL5AQ8N109 375 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 ACOT12Q8WYK0 555 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 GGHQ92820 318 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 C5orf30Q96GV9 206 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 C9orf16Q9BUW7 83 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 OR2D2Q9H210 308 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 C12orf4Q9NQ89 552 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.42
CHCHD3-202ENST00000423635 CELP19835 753 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 ARL3P36405 182 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 TMEM50BP56557 158 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 KLK9Q2XQG4 91 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 OR4A4PQ8NGN8 299 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 OR1L6Q8NGR2 347 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 OSR1Q8TAX0 266 aaPredicted RBP12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 KCNK15Q9H427 330 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms