RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 IGHV3-43A0A0B4J1X8 118 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 IL6RP08887 468 aaPredicted RBP13.99□□□□□ -0.17
PKP4-204ENST00000421462 IGHV3-43DP0DP04 118 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 AMTP48728 403 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 PTTG1IPP53801 180 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 Q6ZN92 141 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 STPG4Q8N801 248 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 APOBEC3DQ96AK3 386 aaPredicted RBP13.99□□□□□ -0.17
PKP4-204ENST00000421462 CCDC74BQ96LY2 380 aa13.99□□□□□ -0.17
PKP4-204ENST00000421462 NCKAP5O14513 1909 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 NTF3P20783 257 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 RNF151Q2KHN1 245 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 SPATA45Q537H7 98 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 ASPHD1Q5U4P2 390 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 SSMEM1Q8WWF3 244 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 GJE1A6NN92 205 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 ANKRD30BLA7E2S9 258 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 C17orf98A8MV24 154 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 LINC00614P0C842 121 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 ACSF3Q4G176 576 aaPredicted RBP13.98□□□□□ -0.17
PKP4-204ENST00000421462 TEX43Q6ZNM6 134 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 C20orf144Q9BQM9 153 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 TIMM9Q9Y5J7 89 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 ICE1Q9Y2F5 2266 aa13.98□□□□□ -0.17
PKP4-204ENST00000421462 IGHV3-13P01766 116 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 IGHV3-7P01780 117 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 GDF1P27539 372 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 HINT1P49773 126 aaPredicted RBP13.97□□□□□ -0.17
PKP4-204ENST00000421462 LHX2P50458 406 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 ETFRF1Q6IPR1 90 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 FAM19A2Q8N3H0 131 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 TPRX1Q8N7U7 411 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 OR52L2PQ8NGH6 319 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 RFESDQ8TAC1 157 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 SF3B5Q9BWJ5 86 aaKnown RBP13.97□□□□□ -0.17
PKP4-204ENST00000421462 KIAA1549Q9HCM3 1950 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 LRRC30A6NM36 301 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 SUMO1P63165 101 aaKnown RBP13.97□□□□□ -0.17
PKP4-204ENST00000421462 HTD2P86397 168 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 GAGE1Q13065 139 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 PRR31Q5SQ13 230 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 H2BFWTQ7Z2G1 175 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 GGNQ86UU5 652 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 CXorf67Q86X51 503 aaPredicted RBP13.97□□□□□ -0.17
PKP4-204ENST00000421462 OR8I2Q8N0Y5 310 aa13.97□□□□□ -0.17
PKP4-204ENST00000421462 RNASE8Q8TDE3 154 aaKnown RBP13.97□□□□□ -0.17
PKP4-204ENST00000421462 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.97□□□□□ -0.17
PKP4-204ENST00000421462 IGHV5-10-1A0A0J9YXX1 117 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 C20orf202A1L168 122 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 OR2H2O95918 312 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 P04436 131 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 RPP30P78346 268 aaKnown RBP13.96□□□□□ -0.17
PKP4-204ENST00000421462 FOXL1Q12952 345 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 TRIM61Q5EBN2 209 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 MIC13Q5XKP0 118 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 SPSB4Q96A44 273 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 STARD4Q96DR4 205 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 SLC35E1Q96K37 410 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.17
PKP4-204ENST00000421462 NAT8BQ9UHF3 227 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 C17orf112F2Z3M2 114 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 PDE6DO43924 150 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 YPEL1O60688 119 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 OR5G3P0C626 314 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 YPEL2Q96QA6 119 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 LRFN3Q9BTN0 628 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 PRDM14Q9GZV8 571 aa13.96□□□□□ -0.17
PKP4-204ENST00000421462 TBL2Q9Y4P3 447 aaKnown RBP13.96□□□□□ -0.17
PKP4-204ENST00000421462 DSPP15924 2871 aaKnown RBP13.96□□□□□ -0.17
PKP4-204ENST00000421462 UBE2NP61088 152 aaKnown RBP13.96□□□□□ -0.18
PKP4-204ENST00000421462 PAFAH1B2P68402 229 aa13.96□□□□□ -0.18
PKP4-204ENST00000421462 FXYD3Q14802 87 aa13.96□□□□□ -0.18
PKP4-204ENST00000421462 PDLIM3Q53GG5 364 aaPredicted RBP13.96□□□□□ -0.18
PKP4-204ENST00000421462 QTRT1Q9BXR0 403 aaKnown RBP13.96□□□□□ -0.18
PKP4-204ENST00000421462 HSPB7Q9UBY9 170 aa13.96□□□□□ -0.18
PKP4-204ENST00000421462 WIPI2Q9Y4P8 454 aa13.96□□□□□ -0.18
PKP4-204ENST00000421462 LRP5LA4QPB2 252 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 GRPP07492 148 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 TIMP3P35625 211 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 LTBRP36941 435 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 MAJINQ3KP22 176 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 CARFQ8N187 725 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 Q8NFD4 153 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 PRDM6Q9NQX0 595 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 RAC2P15153 192 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
PKP4-204ENST00000421462 RANP62826 216 aaKnown RBP13.95□□□□□ -0.18
PKP4-204ENST00000421462 TUSC5Q8IXB3 177 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 ZNF703Q9H7S9 590 aaPredicted RBP13.95□□□□□ -0.18
PKP4-204ENST00000421462 GNB4Q9HAV0 340 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 ASCL3Q9NQ33 180 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 ZNF586Q9NXT0 402 aa13.95□□□□□ -0.18
PKP4-204ENST00000421462 NXPH2O95156 264 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 SRSF7Q16629 238 aaKnown RBP eCLIP13.94□□□□□ -0.18
PKP4-204ENST00000421462 KRTAP27-1Q3LI81 207 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 UHRF2Q96PU4 802 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 ZFP30Q9Y2G7 519 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 IGHV1-45A0A0A0MS14 117 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 RRHO14718 337 aa13.94□□□□□ -0.18
PKP4-204ENST00000421462 CDIPTO14735 213 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms