RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 CLEC18CQ8NCF0 446 aa12.35□□□□□ -0.43
CHRD-204ENST00000420973 ZNF665Q9H7R5 613 aa12.35□□□□□ -0.43
CHRD-204ENST00000420973 MOB1AQ9H8S9 216 aa12.35□□□□□ -0.43
CHRD-204ENST00000420973 TMEM242Q9NWH2 141 aa12.35□□□□□ -0.43
CHRD-204ENST00000420973 ZNF318Q5VUA4 2279 aa12.35□□□□□ -0.43
CHRD-204ENST00000420973 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 HBE1P02100 147 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 HIST1H1DP16402 221 aaKnown RBP12.34□□□□□ -0.43
CHRD-204ENST00000420973 FSTP19883 344 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 PMCHP20382 165 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 PAX2Q02962 417 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 MSMO1Q15800 293 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 FBXW12Q6X9E4 464 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 HOGA1Q86XE5 327 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 LILRA1O75019 489 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 HPNP05981 417 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 CKS1BP61024 79 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
CHRD-204ENST00000420973 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 ATP6V0BQ99437 205 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 HS3ST1O14792 307 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 NXPH3O95157 252 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 ONECUT2O95948 504 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 CLEC3BP05452 202 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 IGLC2P0DOY2 106 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 IGLC3P0DOY3 106 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 WT1P19544 449 aaPredicted RBP12.34□□□□□ -0.43
CHRD-204ENST00000420973 TSPOP30536 169 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 SCAND1P57086 179 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 CLDND2Q8NHS1 167 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 RDH5Q92781 318 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
CHRD-204ENST00000420973 KLF13Q9Y2Y9 288 aaPredicted RBP12.34□□□□□ -0.43
CHRD-204ENST00000420973 ADAMTS20P59510 1910 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 SLC22A20A6NK97 555 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 HAND1O96004 215 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 NPBWR2P48146 333 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
CHRD-204ENST00000420973 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
CHRD-204ENST00000420973 ZNF266Q14584 549 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 OR51G1Q8NGK1 321 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 TMEM54Q969K7 222 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 IL36RNQ9UBH0 155 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 MED12LQ86YW9 2145 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 C21orf140B9A014 251 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 CST7O76096 145 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 AGFG2O95081 481 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 HRASP01112 189 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 PFN1P07737 140 aaKnown RBP12.33□□□□□ -0.44
CHRD-204ENST00000420973 SUPT4H1P63272 117 aaKnown RBP12.33□□□□□ -0.44
CHRD-204ENST00000420973 ALKBH6Q3KRA9 238 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 GTF2H5Q6ZYL4 71 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 IL1F10Q8WWZ1 152 aa12.33□□□□□ -0.44
CHRD-204ENST00000420973 LOC102725191A0A1B0GVB3 256 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 FAM24AA6NFZ4 105 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 LHX2P50458 406 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 ZNF83P51522 516 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 A0A1B0GW64 132 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 SH2D1BO14796 132 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 SERF1AO75920 110 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 AZU1P20160 251 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 GNRHRP30968 328 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 LGALS7P47929 136 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 TMEM267Q0VDI3 215 aaPredicted RBP12.32□□□□□ -0.44
CHRD-204ENST00000420973 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 ETV2O00321 342 aaPredicted RBP12.32□□□□□ -0.44
CHRD-204ENST00000420973 ST8SIA3O43173 380 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 KLK10O43240 276 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 ZNF883P0CG24 379 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 AMTP48728 403 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 FAM90A2PQ658T7 463 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 TCF23Q7RTU1 214 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 LGI3Q8N145 548 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
CHRD-204ENST00000420973 IGKV1D-8A0A087WSZ0 117 aa12.31□□□□□ -0.44
CHRD-204ENST00000420973 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
CHRD-204ENST00000420973 PCBD1P61457 104 aa12.31□□□□□ -0.44
CHRD-204ENST00000420973 PAFAH1B2P68402 229 aa12.31□□□□□ -0.44
CHRD-204ENST00000420973 EIF3IQ13347 325 aaKnown RBP12.31□□□□□ -0.44
CHRD-204ENST00000420973 HIST3H3Q16695 136 aa12.31□□□□□ -0.44
CHRD-204ENST00000420973 ZNF611Q8N823 705 aa12.31□□□□□ -0.44
CHRD-204ENST00000420973 SH2D2AQ9NP31 389 aa12.31□□□□□ -0.44
CHRD-204ENST00000420973 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 266.2 ms