RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ARF1P84077 181 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 HLA-DRB5Q30154 266 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR1L1Q8NH94 360 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 RARRES3Q9UL19 164 aa12.43□□□□□ -0.42
NCKIPSD-204ENST00000416649 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 AQP7P3A6NL99 342 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 SUMO3P55854 103 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 DAZAP2Q15038 168 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 WDR74Q6RFH5 385 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 TMEM105Q8N8V8 129 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 NAT8BQ9UHF3 227 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 PRR14LQ5THK1 2151 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGHV3-64DA0A0J9YX35 117 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZNF253O75346 499 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 TSPOP30536 169 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 HTD2P86397 168 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 RIPPLY2Q5TAB7 128 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 ASCL4Q6XD76 172 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 Q8N976 141 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 OCC1Q8TAD7 63 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 SLC35D1Q9NTN3 355 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR1A1Q9P1Q5 309 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGHV2OR16-5A0A0B4J2B6 119 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 DPRXA6NFQ7 191 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGHV3-9P01782 118 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 CELA2AP08217 269 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 CD99P14209 185 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 B4GALT1P15291 398 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 CCNOP22674 350 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 EDDM3BP56851 147 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 C20orf204Q6ZNR8 217 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 RCHY1Q96PM5 261 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 DUSP23Q9BVJ7 150 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 DOCK10Q96BY6 2186 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 ICE1Q9Y2F5 2266 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 A0A1W2PPV4 95 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 OTX2P32243 289 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 ATP23Q9Y6H3 246 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 USF3Q68DE3 2245 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 SCO2A0A1W2PP80 73 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 PDE6DO43924 150 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 C3orf79P0CE67 100 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 TNFSF4P23510 183 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGFBP7Q16270 282 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 KLHDC1Q8N7A1 406 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 TCTEX1D1Q8N7M0 179 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR1F12Q8NHA8 337 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZNF596Q8TC21 504 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 UHRF2Q96PU4 802 aa12.41□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZNF32P17041 273 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 TIMP3P35625 211 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 GPM6AP51674 278 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR8I2Q8N0Y5 310 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 OR10P1Q8NGE3 313 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 TMEM147Q9BVK8 224 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 ARRDC1-AS1Q9H2J1 176 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 GSX1Q9H4S2 264 aaPredicted RBP12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 TOMM40O96008 361 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 SLC25A6P12236 298 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 RNPS1Q15287 305 aaKnown RBP12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 C9orf135Q5VTT2 229 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 MRGPRDQ8TDS7 321 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 ZPBPQ9BS86 351 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 NPCDR1Q9BY65 106 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 IL36GQ9NZH8 169 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 TP73-AS1Q9UF72 201 aa12.4□□□□□ -0.42
NCKIPSD-204ENST00000416649 IGHV2-70DA0A0C4DH43 119 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 GFRA1P56159 465 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 TCL1AP56279 114 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 RPL19P84098 196 aaKnown RBP12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 RHBDD2Q6NTF9 364 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 PCSK4Q6UW60 755 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZNF488Q96MN9 340 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 TIMM9Q9Y5J7 89 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 CTXN2P0C2S0 81 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 ST6GALNAC6Q969X2 333 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
NCKIPSD-204ENST00000416649 TMPRSS2O15393 492 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 ESDP10768 282 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 PSG1P11464 419 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 CRYGSP22914 178 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 RELBQ01201 579 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 GCNT2Q8N0V5 402 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 FAM58AQ8N1B3 248 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 FGFRL1Q8N441 504 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 LSM10Q969L4 123 aaKnown RBP12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 IL36BQ9NZH7 164 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 A0A1W2PS18 150 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZNF83P51522 516 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 ZNF816Q0VGE8 651 aaPredicted RBP12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 Q56UQ5 140 aa12.38□□□□□ -0.43
NCKIPSD-204ENST00000416649 RAET1LQ5VY80 246 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms