RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ZNF285Q96NJ3 590 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR51I1Q9H343 314 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ZNF581Q9P0T4 197 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CELSR3Q9NYQ7 3312 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 GTF3C1Q12789 2109 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CELSR1Q9NYQ6 3014 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CTNSO60931 367 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TYMSP04818 313 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 FABP1P07148 127 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR12D1P0DN82 309 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ICAM2P13598 275 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 FOLR2P14207 255 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 RAB5AP20339 215 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 PSMB1P20618 241 aaKnown RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 PPICP45877 212 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CRISP3P54108 245 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TNFRSF9Q07011 255 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 BSXQ3C1V8 233 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TMEM176BQ3YBM2 270 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 COX19Q49B96 90 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 IDNKQ5T6J7 187 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 UBE2UQ5VVX9 321 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 UGT2A3Q6UWM9 527 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 PPP1R27Q86WC6 154 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ZCCHC24Q8N2G6 241 aaKnown RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 GATD1Q8NB37 220 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR10G3Q8NGC4 313 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 RASSF5Q8WWW0 418 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TAMM41Q96BW9 452 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 RDH12Q96NR8 316 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 SLC25A2Q9BXI2 301 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 SAMD10Q9BYL1 202 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 NXF2Q9GZY0 626 aaKnown RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 CLCF1Q9UBD9 225 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 SLC22A13Q9Y226 551 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 KLF13Q9Y2Y9 288 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 ANKRD20A5PA0PJZ0 165 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 H0Y980 276 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TNFRSF11BO00300 401 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 UPK1AO00322 258 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 HMGN4O00479 90 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 ZNF354AO60765 605 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 ALOX12BO75342 701 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 RPP14O95059 124 aaKnown RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 GPR75O95800 540 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 SEMG1P04279 462 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 HMGN2P05204 90 aaKnown RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 SERPINA7P05543 415 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TFPTP0C1Z6 253 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OCMP0CE72 109 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 CPMP14384 443 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 SPNP16150 400 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR1E2P47887 323 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CYB561P49447 251 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 GFERP55789 205 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 RAB38P57729 211 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TAS2R31P59538 309 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 AP3S2P59780 193 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 PMVKQ15126 192 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TBC1D28Q2M2D7 210 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 KPRPQ5T749 579 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 TBPL2Q6SJ96 375 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OPN5Q6U736 354 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 WDR82Q6UXN9 313 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 C8orf59Q8N0T1 100 aaPredicted RBP1.88□□□□□ -2.11
MCF2-204ENST00000414978 C19orf18Q8NEA5 215 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR5D16Q8NGK9 328 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 OR52P1PQ8NH57 321 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 MRAP2Q96G30 205 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 TEAD3Q99594 435 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 KRTAP4-8Q9BYQ9 185 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 FAM60AQ9NP50 221 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 USE1Q9NZ43 259 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 CALML5Q9NZT1 146 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 VAX2Q9UIW0 290 aa1.88□□□□□ -2.11
MCF2-204ENST00000414978 IGHV1-69DA0A0B4J2H0 117 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 IGHV5-51A0A0C4DH38 117 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 A0A0J9YWU9 116 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 RBFOX3A6NFN3 312 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR2AT4A6NND4 320 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CHST10O43529 356 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 UGT2B11O75310 529 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR2B3O76000 313 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 GADD45GO95257 159 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 RAB36O95755 333 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 EPPINO95925 133 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CD28P10747 220 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 SMIM11AP58511 58 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR1Q1Q15612 314 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 DHRS4L2Q6PKH6 230 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CEMP1Q6PRD7 247 aaPredicted RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 SLC51BQ86UW2 128 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CALHM1Q8IU99 346 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 CA13Q8N1Q1 262 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 PSMF1Q92530 271 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 FMC1Q96HJ9 113 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR7D2Q96RA2 312 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 MRPS26Q9BYN8 205 aaKnown RBP1.87□□□□□ -2.11
MCF2-204ENST00000414978 GABARAPL1Q9H0R8 117 aa1.87□□□□□ -2.11
MCF2-204ENST00000414978 OR51B2Q9Y5P1 312 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms