RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ZNF439Q8NDP4 499 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 DDB2Q92466 427 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 PARD6GQ9BYG4 376 aaPredicted RBP20.23■□□□□ 0.83
VRK2-202ENST00000412104 TMEM178BH3BS89 294 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 OR8U8P0C7N1 319 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 KIR2DS2P43631 304 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 CCL20P78556 96 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 CIB3Q96Q77 187 aaPredicted RBP20.23■□□□□ 0.83
VRK2-202ENST00000412104 PSMG3Q9BT73 122 aaPredicted RBP20.23■□□□□ 0.83
VRK2-202ENST00000412104 QTRT1Q9BXR0 403 aaKnown RBP20.23■□□□□ 0.83
VRK2-202ENST00000412104 SLC25A10Q9UBX3 287 aaPredicted RBP20.23■□□□□ 0.83
VRK2-202ENST00000412104 KPTNQ9Y664 436 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 HCFC1P51610 2035 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 A0A1B0GW64 132 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 hADV38S2A0JD32 116 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 MMP23AO75900 390 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 OR2B8PP59922 312 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 SPINK9Q5DT21 86 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 SSX9Q7RTT3 188 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 KDF1Q8NAX2 398 aaPredicted RBP20.22■□□□□ 0.83
VRK2-202ENST00000412104 WDR61Q9GZS3 305 aaKnown RBP20.22■□□□□ 0.83
VRK2-202ENST00000412104 DYNLRB1Q9NP97 96 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 IGF2RP11717 2491 aa20.22■□□□□ 0.83
VRK2-202ENST00000412104 PPIAL4EA0A075B759 164 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 UBE2L5PA0A1B0GUS4 154 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 LOC105371267A0A1B0GV96 52 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 BTBD17A6NE02 478 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 FAM90A9PA6NNJ1 464 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 CEBPZOSA8MTT3 80 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 PPIAL4DF5H284 164 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 PPIAL4FP0DN26 164 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 TLE4Q04727 773 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 TMEM30BQ3MIR4 351 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 PRAMEF5Q5TYX0 476 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 SP5Q6BEB4 398 aaPredicted RBP20.21■□□□□ 0.83
VRK2-202ENST00000412104 CCL17Q92583 94 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 PPIAL4AQ9Y536 164 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 LINC00312Q9Y6C7 94 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 FAM90A27PA6NNH2 459 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 GNG10P50151 68 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 ERVK-16P61578 105 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 AARDQ4LEZ3 155 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 TMEM88Q6PEY1 159 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 LYG1Q8N1E2 194 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 ST6GALNAC3Q8NDV1 305 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 ZNF251Q9BRH9 671 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 TMEM106BQ9NUM4 274 aa20.21■□□□□ 0.83
VRK2-202ENST00000412104 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.2■□□□□ 0.82
VRK2-202ENST00000412104 PMS2P5A8MQ11 134 aa20.2■□□□□ 0.82
VRK2-202ENST00000412104 VKORC1L1Q8N0U8 176 aa20.2■□□□□ 0.82
VRK2-202ENST00000412104 OR4S2Q8NH73 311 aa20.2■□□□□ 0.82
VRK2-202ENST00000412104 HIPK2Q9H2X6 1198 aa20.2■□□□□ 0.82
VRK2-202ENST00000412104 RPUSD1Q9UJJ7 312 aaKnown RBP20.2■□□□□ 0.82
VRK2-202ENST00000412104 CD3EP07766 207 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 NQO2P16083 231 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 ATF4P18848 351 aaPredicted RBP20.19■□□□□ 0.82
VRK2-202ENST00000412104 MRPS11P82912 194 aaKnown RBP20.19■□□□□ 0.82
VRK2-202ENST00000412104 SFT2D1Q8WV19 159 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 KIAA1456Q9P272 454 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 ROS1P08922 2347 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 DOCK11Q5JSL3 2073 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 CCL21O00585 134 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 FCN3O75636 299 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 DHRS7BQ6IAN0 325 aaPredicted RBP20.19■□□□□ 0.82
VRK2-202ENST00000412104 CBLN2Q8IUK8 224 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 CLRN3Q8NCR9 226 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 TAF15Q92804 592 aaKnown RBP eCLIP20.19■□□□□ 0.82
VRK2-202ENST00000412104 RARRES2Q99969 163 aa20.19■□□□□ 0.82
VRK2-202ENST00000412104 THBS3P49746 956 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 FBXL19-AS1Q494R0 122 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 OR4A16Q8NH70 328 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 LINC01560Q8TB33 94 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 MS4A5Q9H3V2 200 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 VSIRQ9H7M9 311 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 RPRMQ9NS64 109 aa20.18■□□□□ 0.82
VRK2-202ENST00000412104 IFNA17P01571 189 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 CHRNB4P30926 498 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 APOBEC3AP31941 199 aaPredicted RBP20.17■□□□□ 0.82
VRK2-202ENST00000412104 RPL31P62899 125 aaKnown RBP20.17■□□□□ 0.82
VRK2-202ENST00000412104 MEF2CQ06413 473 aaPredicted RBP20.17■□□□□ 0.82
VRK2-202ENST00000412104 EFNB3Q15768 340 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 ATP6V1FQ16864 119 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 OR10P1Q8NGE3 313 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 TMEM147Q9BVK8 224 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 TMEM140Q9NV12 185 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 YLPM1P49750 1951 aaKnown RBP20.17■□□□□ 0.82
VRK2-202ENST00000412104 RBFOX3A6NFN3 312 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 HBE1P02100 147 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 SERF2P84101 59 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 SLC25A48Q6ZT89 311 aaKnown RBP20.17■□□□□ 0.82
VRK2-202ENST00000412104 ZNF383Q8NA42 475 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 PINX1Q96BK5 328 aaKnown RBP20.17■□□□□ 0.82
VRK2-202ENST00000412104 SLC35B3Q9H1N7 401 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 GAL3ST2Q9H3Q3 398 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 SMDT1Q9H4I9 107 aa20.17■□□□□ 0.82
VRK2-202ENST00000412104 POLEQ07864 2286 aa20.16■□□□□ 0.82
VRK2-202ENST00000412104 GRNP28799 593 aaKnown RBP20.16■□□□□ 0.82
VRK2-202ENST00000412104 RPS16P62249 146 aaKnown RBP20.16■□□□□ 0.82
VRK2-202ENST00000412104 RELBQ01201 579 aa20.16■□□□□ 0.82
VRK2-202ENST00000412104 ADTRPQ96IZ2 230 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms