RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PXMP4Q9Y6I8 212 aa9.72□□□□□ -0.85
PRPF40A-202ENST00000410080 LIPFP07098 398 aa9.72□□□□□ -0.85
PRPF40A-202ENST00000410080 MC5RP33032 325 aa9.72□□□□□ -0.85
PRPF40A-202ENST00000410080 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
PRPF40A-202ENST00000410080 LSM10Q969L4 123 aaKnown RBP9.72□□□□□ -0.85
PRPF40A-202ENST00000410080 COX14Q96I36 57 aa9.72□□□□□ -0.85
PRPF40A-202ENST00000410080 RCC2Q9P258 522 aaKnown RBP9.71□□□□□ -0.85
PRPF40A-202ENST00000410080 TMEFF2Q9UIK5 374 aaPredicted RBP9.71□□□□□ -0.85
PRPF40A-202ENST00000410080 COL11A2P13942 1736 aaPredicted RBP9.71□□□□□ -0.85
PRPF40A-202ENST00000410080 H3BTX0 84 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 NDUFB6O95139 128 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 OTX1P32242 354 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 TNFSF10P50591 281 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 MRPL30Q8TCC3 161 aaKnown RBP9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 NPFFR1Q9GZQ6 430 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 WDR54Q9H977 334 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 SLC25A20O43772 301 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 MESTQ5EB52 335 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 LYZL2Q7Z4W2 148 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 ALG14Q96F25 216 aa9.71□□□□□ -0.86
PRPF40A-202ENST00000410080 IL11P20809 199 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 PRSS54Q6PEW0 395 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 ISOC2Q96AB3 205 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 RAB33BQ9H082 229 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 IL19Q9UHD0 177 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 K7ERU9 68 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 P2RY1P47900 373 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 SPAG8Q99932 426 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 AKIP1Q9NQ31 210 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 J3QT63 122 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 FXYD3Q14802 87 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 IGSF11Q5DX21 431 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 VN1R4Q7Z5H5 301 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 GLMPQ8WWB7 406 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 C10orf35Q96D05 121 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 HOXA3O43365 443 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 UPK3AO75631 287 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 SELENOTP62341 195 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 PRB3Q04118 309 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 LY6DQ14210 128 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM177Q53S58 311 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 BHLHA9Q7RTU4 235 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 C9orf40Q8IXQ3 194 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 WNT10AQ9GZT5 417 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 ZNF324BQ6AW86 544 aaPredicted RBP9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 PET117Q6UWS5 81 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 ZNF385AQ96PM9 386 aaKnown RBP9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 RPL36A-HNRNPH2H7BZ11 118 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 C12orf73Q69YU5 71 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 FAM89BQ8N5H3 189 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 ANGPTL4Q9BY76 406 aa9.7□□□□□ -0.86
PRPF40A-202ENST00000410080 IGLV3-16A0A075B6K0 115 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 HPRT1P00492 218 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 C3orf36Q3SXR2 165 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 NXT2Q9NPJ8 142 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 EGR1P18146 543 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 DEGS2Q6QHC5 323 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 CLEC7AQ9BXN2 247 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 NPVFQ9HCQ7 196 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 ARHGAP21Q5T5U3 1957 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 PLCE1Q9P212 2302 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 TRBV7-9A0A0J9YWB2 115 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 PRDM6Q9NQX0 595 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 A0A1B0GV72 72 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 M0R381 172 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 CDS2O95674 445 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 CD33P20138 364 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 FDCSPQ8NFU4 85 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM160Q9NX00 188 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 MTFP1Q9UDX5 166 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 COL5A3P25940 1745 aaPredicted RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 SNRPEP62304 92 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 OR9G4Q8NGQ1 327 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 JOSD1Q15040 202 aaPredicted RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM70Q9BUB7 260 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 MRM2Q9UI43 246 aaKnown RBP9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 ANAPC1Q9H1A4 1944 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 NOTCH3Q9UM47 2321 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 EML6Q6ZMW3 1958 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 OR2H2O95918 312 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 HKR1P10072 659 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 SRD5A1P18405 259 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 FOXB2Q5VYV0 432 aa9.69□□□□□ -0.86
PRPF40A-202ENST00000410080 PGPA6NDG6 321 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 ZIC3O60481 467 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 ZP3P21754 424 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 IL4P05112 153 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 P2RY6Q15077 328 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 PRSS53Q2L4Q9 553 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 FAM74A3Q4VXF1 159 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms