RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 DIRAS2Q96HU8 199 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 NARS2Q96I59 477 aaKnown RBP3.32□□□□□ -1.88
LSM5-206ENST00000409987 DERL3Q96Q80 235 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 OR52E6Q96RD3 313 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 THTPAQ9BU02 230 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 TRIM4Q9C037 500 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 DCSTAMPQ9H295 470 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 NMNAT1Q9HAN9 279 aaPredicted RBP3.32□□□□□ -1.88
LSM5-206ENST00000409987 ZNRD1Q9P1U0 126 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 PRELID3BQ9Y3B1 194 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 NFAT5O94916 1531 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 ADGRB1O14514 1584 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 TMEM131Q92545 1883 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 UNC79Q9P2D8 2635 aa3.32□□□□□ -1.88
LSM5-206ENST00000409987 NCOR1O75376 2440 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 TIAM2Q8IVF5 1701 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 CD163L1Q9NR16 1453 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 A8MWL6 223 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 RGS5O15539 181 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 HLA-DQA1P01909 254 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 OR12D1P0DN82 309 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 CD36P16671 472 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 PSMB3P49720 205 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 GZMMP51124 257 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 ARPC4P59998 168 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 HIST1H3AP68431 136 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 H3F3AP84243 136 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 PRDX4Q13162 271 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 MOGQ16653 247 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 ABCA11PQ4W5N1 156 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 CYB5R2Q6BCY4 276 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 HIST2H3AQ71DI3 136 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 GLT6D1Q7Z4J2 308 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 ATP5L2Q7Z4Y8 100 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 TBC1D19Q8N5T2 526 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 ZNF676Q8N7Q3 588 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.31□□□□□ -1.88
LSM5-206ENST00000409987 OR2Z1Q8NG97 314 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 OR8A1Q8NGG7 326 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 OR4X1Q8NH49 305 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 APOBEC3DQ96AK3 386 aaPredicted RBP3.31□□□□□ -1.88
LSM5-206ENST00000409987 GALMQ96C23 342 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 HOPXQ9BPY8 73 aaPredicted RBP3.31□□□□□ -1.88
LSM5-206ENST00000409987 TMEM109Q9BVC6 243 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 GTSF1LQ9H1H1 148 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 TRABDQ9H4I3 376 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 DOK5Q9P104 306 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 VPREB3Q9UKI3 123 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 DCHS1Q96JQ0 3298 aa3.31□□□□□ -1.88
LSM5-206ENST00000409987 RGPD5Q99666 1765 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 TRAV8-1A0A0A6YYK1 113 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 PQLC2LA1A4F0 135 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 EEF1E1-BLOC1S5C9J1V9 151 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 H3BSA7 217 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 EEF1E1O43324 174 aaKnown RBP3.3□□□□□ -1.88
LSM5-206ENST00000409987 CXorf1O96002 111 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 OR13C7P0DN81 318 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
LSM5-206ENST00000409987 PYCR3Q53H96 274 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 MRPL2Q5T653 305 aaKnown RBP3.3□□□□□ -1.88
LSM5-206ENST00000409987 TRIQKQ629K1 86 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 FAM71E1Q6IPT2 247 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 ALKAL1Q6UXT8 129 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 TCF23Q7RTU1 214 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 DPPA2Q7Z7J5 298 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 TMEM75Q8N9X5 138 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 OR2K2Q8NGT1 345 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 ANKRD36BP1Q96IX9 119 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 CYYR1Q96J86 154 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 MED18Q9BUE0 208 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 KIFC1Q9BW19 673 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 ZNF222Q9UK12 451 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 HHLA2Q9UM44 414 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 TMEM14AQ9Y6G1 99 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 DICER1Q9UPY3 1922 aaKnown RBP3.3□□□□□ -1.88
LSM5-206ENST00000409987 DOT1LQ8TEK3 1739 aa3.3□□□□□ -1.88
LSM5-206ENST00000409987 DNAH12Q6ZR08 3092 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 CCDC88AQ3V6T2 1871 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 MAP2P11137 1827 aaKnown RBP3.29□□□□□ -1.88
LSM5-206ENST00000409987 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 A0A1B0GV50 99 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 STK16O75716 305 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 POP7O75817 140 aaKnown RBP3.29□□□□□ -1.88
LSM5-206ENST00000409987 OR7C1O76099 320 aaPredicted RBP3.29□□□□□ -1.88
LSM5-206ENST00000409987 CNTFRP26992 372 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 HSPA9P38646 679 aaKnown RBP3.29□□□□□ -1.88
LSM5-206ENST00000409987 CXCL12P48061 93 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 NUDT2P50583 147 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 CTBP2P56545 445 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 PSME3P61289 254 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 PSG4Q00888 419 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 CDK10Q15131 360 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 ALX1Q15699 326 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 FAM201AQ5SY85 155 aa3.29□□□□□ -1.88
LSM5-206ENST00000409987 C1orf194Q5T5A4 169 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms