RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SFXN3Q9BWM7 321 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 NRN1Q9NPD7 142 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 KCNIP2Q9NS61 270 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 SMPXQ9UHP9 88 aa9.01□□□□□ -0.97
NIF3L1-204ENST00000409357 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 IGKV1D-43A0A0B4J1Z2 117 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF891A8MT65 544 aaPredicted RBP9□□□□□ -0.97
NIF3L1-204ENST00000409357 HCRTR1O43613 425 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 TUSC2O75896 110 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 FCGR2AP12318 317 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 REG1BP48304 166 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 THBS3P49746 956 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 VAMP3Q15836 100 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 TMEM95Q3KNT9 176 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 FFAR4Q5NUL3 377 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 MCEMP1Q8IX19 187 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 DEFB125Q8N687 156 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 TMEM234Q8WY98 164 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 KCNS1Q96KK3 526 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 HDHD3Q9BSH5 251 aaPredicted RBP9□□□□□ -0.97
NIF3L1-204ENST00000409357 MED13Q9UHV7 2174 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 A0A0J9YY10 115 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 MDFIC2A0A1B0GVS7 189 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 M0QZ24 198 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 NKX2-8O15522 239 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM87AP0C7U9 286 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 SRD5A2P31213 254 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 PRTGQ2VWP7 1150 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 HLA-DRB5Q30154 266 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 C1orf185Q5T7R7 199 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF468Q5VIY5 522 aaPredicted RBP9□□□□□ -0.97
NIF3L1-204ENST00000409357 SLC25A47Q6Q0C1 308 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 PNPLA5Q7Z6Z6 429 aaPredicted RBP9□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF843Q8N446 348 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 ST8SIA1Q92185 356 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 TMEM204Q9BSN7 226 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 SF3B5Q9BWJ5 86 aaKnown RBP9□□□□□ -0.97
NIF3L1-204ENST00000409357 TUBG2Q9NRH3 451 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 FGF21Q9NSA1 209 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 POLR1DQ9Y2S0 133 aa9□□□□□ -0.97
NIF3L1-204ENST00000409357 ASH1LQ9NR48 2969 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 A0A1B0GUS0 222 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 AHRRA9YTQ3 701 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 SYNGR2O43760 224 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 KITLGP21583 273 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 NPPCP23582 126 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 S100GP29377 79 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 BIDP55957 195 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 LGALS4P56470 323 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 KRTDAPP60985 99 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 RBPJQ06330 500 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 IL11RAQ14626 422 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM69BQ5VUD6 431 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 LRP11Q86VZ4 500 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 Q8NFD4 153 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 OR10G8Q8NGN5 311 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 CPT1CQ8TCG5 803 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF501Q96CX3 271 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 CYYR1Q96J86 154 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 FAM60AQ9NP50 221 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 PPIAL4AQ9Y536 164 aa8.99□□□□□ -0.97
NIF3L1-204ENST00000409357 LRRK2Q5S007 2527 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 H0YJW9 148 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 CD5LO43866 347 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 PDCD6O75340 191 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 ZNF324O75467 553 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 HLA-DRB1P01911 266 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 HLA-DOBP13765 273 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 CD33P20138 364 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 COX5AP20674 150 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 OPRM1P35372 400 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 TIMP3P35625 211 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 HINT1P49773 126 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 RRADP55042 308 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 SUMO3P55854 103 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 PAX2Q02962 417 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 TBR1Q16650 682 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 DEFB110Q30KQ9 67 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 STUMQ69YW2 141 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 VHLLQ6RSH7 139 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 C6orf15Q6UXA7 325 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 C12orf54Q6X4T0 127 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 METTL27Q8N6F8 245 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 SCCPDHQ8NBX0 429 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 OR1L3Q8NH93 324 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 DYRK2Q92630 601 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 BCL2L2Q92843 193 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 ADIPOR1Q96A54 375 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 OR4C12Q96R67 309 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 LANCL2Q9NS86 450 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 RARRES3Q9UL19 164 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 PCSK5Q92824 1860 aa8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 PHF3Q92576 2039 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 RP1L1Q8IWN7 2480 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-204ENST00000409357 A0A1W2PS18 150 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms