RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 LIN7CQ9NUP9 197 aaKnown RBP26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 NUDT15Q9NV35 164 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 VPREB3Q9UKI3 123 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 SETD2Q9BYW2 2564 aaPredicted RBP26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 TRAV6A0A075B6T7 132 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 TEX13DA0A0J9YY54 714 aaPredicted RBP26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 PEX14O75381 377 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 CRYZL1O95825 349 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 RRASP10301 218 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 TMEM86BQ8N661 226 aa26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 FLYWCH2Q96CP2 140 aaKnown RBP26.63■■□□□ 1.85
CSNK1E-204ENST00000403904 PITPNC1Q9UKF7 332 aa26.62■■□□□ 1.85
CSNK1E-204ENST00000403904 C3orf85A0A1B0GTC6 90 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 CRYM-AS1A6NIL9 109 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 CBX3Q13185 183 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 Q8N6K4 173 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 OR4C13Q8NGP0 309 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 TP53RKQ96S44 253 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 NAA60Q9H7X0 242 aa26.61■■□□□ 1.85
CSNK1E-204ENST00000403904 TCF21O43680 179 aa26.6■■□□□ 1.85
CSNK1E-204ENST00000403904 KIR2DS2P43631 304 aa26.6■■□□□ 1.85
CSNK1E-204ENST00000403904 SP6Q3SY56 376 aa26.6■■□□□ 1.85
CSNK1E-204ENST00000403904 DUSP18Q8NEJ0 188 aa26.6■■□□□ 1.85
CSNK1E-204ENST00000403904 OR4S2Q8NH73 311 aa26.6■■□□□ 1.85
CSNK1E-204ENST00000403904 ANXA7P20073 488 aaKnown RBP26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 CNTFRP26992 372 aa26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 RPS16P62249 146 aaKnown RBP26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 SLC25A42Q86VD7 318 aa26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 LURAP1LQ8IV03 231 aa26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 SGPP2Q8IWX5 399 aa26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 JMJD8Q96S16 334 aa26.59■■□□□ 1.85
CSNK1E-204ENST00000403904 F2RL1P55085 397 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 TMEM177Q53S58 311 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 TMEM128Q5BJH2 165 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 DHRS7BQ6IAN0 325 aaPredicted RBP26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 RBM14Q96PK6 669 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 SLC25A33Q9BSK2 321 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 NUBP2Q9Y5Y2 271 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 JMJD1CQ15652 2540 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 CHST1O43916 411 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 VSIG10L2P0DP72 767 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 SUPT4H1P63272 117 aaKnown RBP26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 ZNF585BQ52M93 769 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 CD300LFQ8TDQ1 290 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 HARBI1Q96MB7 349 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 BEX1Q9HBH7 125 aa26.58■■□□□ 1.85
CSNK1E-204ENST00000403904 H0Y980 276 aa26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 CLDN34H7C241 214 aa26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 SHOXO15266 292 aa26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 RBFOX2O43251 390 aaKnown RBP eCLIP26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 H2AFB2P0C5Z0 115 aa26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 OR5AC1P0C628 307 aa26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 TCTEX1D1Q8N7M0 179 aa26.57■■□□□ 1.84
CSNK1E-204ENST00000403904 A0A0A6YYJ9 748 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 NCBP2LA6PVI3 153 aaKnown RBP26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 OR2F2O95006 317 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 SPNP16150 400 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 LPAR6P43657 344 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 RAB25P57735 213 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 TAS2R31P59538 309 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 MMDQ15546 238 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 PLSCR3Q9NRY6 295 aa26.56■■□□□ 1.84
CSNK1E-204ENST00000403904 SRRM4A7MD48 611 aaKnown RBP26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 S1PR2O95136 353 aa26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 PTTG1O95997 202 aa26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 UBA52P62987 128 aaKnown RBP26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 SRSF2Q01130 221 aaKnown RBP26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 DHODHQ02127 395 aa26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 OSR1Q8TAX0 266 aaPredicted RBP26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 RNF5Q99942 180 aa26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 KCNIP3Q9Y2W7 256 aa26.55■■□□□ 1.84
CSNK1E-204ENST00000403904 HPRT1P00492 218 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 IFNA2P01563 188 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 PPP1R1AQ13522 171 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 PLET1Q6UQ28 207 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 LIAT1Q6ZQX7 453 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 GPR137BO60478 399 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 SERPINE2P07093 398 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 VAMP1P23763 118 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 GLYATL2Q8WU03 294 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 GALNT14Q96FL9 552 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 PLEKHA2Q9HB19 425 aa26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 FAM212BQ9NTI7 297 aaPredicted RBP26.54■■□□□ 1.84
CSNK1E-204ENST00000403904 RNASE1P07998 156 aaKnown RBP26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 OR4E1P0C645 316 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 LGALS7P47929 136 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 RGS21Q2M5E4 152 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 VKORC1L1Q8N0U8 176 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 TSNAXQ99598 290 aaKnown RBP26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 TMEM222Q9H0R3 208 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 PRR13Q9NZ81 148 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 MOB4Q9Y3A3 225 aa26.53■■□□□ 1.84
CSNK1E-204ENST00000403904 NBR2O15453 112 aa26.52■■□□□ 1.84
CSNK1E-204ENST00000403904 IGLV2-23P01705 113 aa26.52■■□□□ 1.84
CSNK1E-204ENST00000403904 UCP1P25874 307 aa26.52■■□□□ 1.84
CSNK1E-204ENST00000403904 C16orf82Q7Z2V1 217 aa26.52■■□□□ 1.84
CSNK1E-204ENST00000403904 OR8H1Q8NGG4 311 aa26.52■■□□□ 1.84
CSNK1E-204ENST00000403904 B3GALNT1O75752 331 aa26.51■■□□□ 1.83
CSNK1E-204ENST00000403904 UBE2MP61081 183 aaKnown RBP26.51■■□□□ 1.83
CSNK1E-204ENST00000403904 PSG5Q15238 335 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms