RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SPATA31E1Q6ZUB1 1445 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 ADGRL3Q9HAR2 1447 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZNF407Q9C0G0 2248 aa1.81□□□□□ -2.12
HMGB1P17-201ENST00000403495 LTBP4Q8N2S1 1624 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 YLPM1P49750 1951 aaKnown RBP1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 TMED7-TICAM2A0A0A6YYA0 188 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 A0A1B0GV50 99 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 EEF1E1-BLOC1S5C9J1V9 151 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 CNIH1O95406 144 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 CD7P09564 240 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR5G3P0C626 314 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 FAM228BP0C875 321 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 OPRM1P35372 400 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 ARF6P62330 175 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 GLO1Q04760 184 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 TNFRSF9Q07011 255 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 FOXF1Q12946 379 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 PMAIP1Q13794 54 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 FAM229BQ4G0N7 80 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 C5orf46Q6UWT4 87 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 C1orf174Q8IYL3 243 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 C1orf158Q8N1D5 194 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 DEFB125Q8N687 156 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR2T27Q8NH04 317 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 CPNE2Q96FN4 548 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 TLNRD1Q9H1K6 362 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 FAM96AQ9H5X1 160 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 ANAPC10Q9UM13 185 aa1.8□□□□□ -2.12
HMGB1P17-201ENST00000403495 LOC102725191A0A1B0GVB3 256 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 VPS37CA5D8V6 355 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 PSMD12O00232 456 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR5F1O95221 314 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 APOMO95445 188 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 CDS2O95674 445 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 SERPINA1P01009 418 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 CCL1P22362 96 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 TAS2R45P59539 299 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 FGF12P61328 243 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 EDDM3AQ14507 147 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 PLPPR5Q32ZL2 321 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 ACOT6Q3I5F7 207 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 FAM201AQ5SY85 155 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 FAM173BQ6P4H8 233 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZFAND2AQ8N6M9 145 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR2D3Q8NGH3 330 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 LHFPL5Q8TAF8 219 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 CD200R1Q8TD46 325 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 DCUN1D1Q96GG9 259 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR52E6Q96RD3 313 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 C9orf16Q9BUW7 83 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 C1QTNF6Q9BXI9 259 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 FBXO5Q9UKT4 447 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 PXMP4Q9Y6I8 212 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 CEP170Q5SW79 1584 aa1.79□□□□□ -2.12
HMGB1P17-201ENST00000403495 THSD7AQ9UPZ6 1657 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 GRIN2BQ13224 1484 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 TTC21AQ8NDW8 1320 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 PQLC2LA1A4F0 135 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR6C6A6NF89 314 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR4C45A6NMZ5 311 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 C17orf98A8MV24 154 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 A8MWP6 167 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 PSCAO43653 123 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 ZNF73O43830 326 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 PSG4Q00888 419 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 FABP9Q0Z7S8 132 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 MRPL51Q4U2R6 128 aaKnown RBP1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 PYCR3Q53H96 274 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 TMEM97Q5BJF2 176 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 ALKAL1Q6UXT8 129 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 S100A7AQ86SG5 101 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR6V1Q8N148 313 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 UMODL1-AS1Q8N2C9 162 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR2T4Q8NH00 348 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 OR4K13Q8NH42 304 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 C12orf43Q96C57 262 aaKnown RBP1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 CEP19Q96LK0 163 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 CCL13Q99616 98 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 CXorf21Q9HAI6 301 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 STOML2Q9UJZ1 356 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 HHLA2Q9UM44 414 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 SNX12Q9UMY4 172 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 PKIGQ9Y2B9 76 aa1.78□□□□□ -2.12
HMGB1P17-201ENST00000403495 IGHV1-69-2A0A0G2JMI3 117 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 INMT-MINDY4F8WBC2 141 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 HAND1O96004 215 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 SOD1P00441 154 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 ESDP10768 282 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 SERPINB9P50453 376 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 GZMMP51124 257 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 PSME3P61289 254 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 VBP1P61758 197 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 HOXC5Q00444 222 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 HTR4Q13639 388 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 CDK10Q15131 360 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 TAF1AQ15573 450 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 GUK1Q16774 197 aa1.77□□□□□ -2.13
HMGB1P17-201ENST00000403495 STX12Q86Y82 276 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms