RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 WFDC3Q8IUB2 231 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 ZNF385AQ96PM9 386 aaKnown RBP7.66□□□□□ -1.18
PTPRM-202ENST00000400053 HSPB7Q9UBY9 170 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 SPTBN1Q01082 2364 aaKnown RBP7.66□□□□□ -1.18
PTPRM-202ENST00000400053 RPL36A-HNRNPH2H7BZ11 118 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 K7N7A8 449 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 ZNHIT1O43257 154 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 TRIP6Q15654 476 aaKnown RBP7.66□□□□□ -1.18
PTPRM-202ENST00000400053 SLC25A34Q6PIV7 304 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 CTHRC1Q96CG8 243 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 SPTBN2O15020 2390 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 TRBV5-7A0A0A0MS05 114 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 ATP5IP56385 69 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-202ENST00000400053 RPL31P62899 125 aaKnown RBP7.66□□□□□ -1.18
PTPRM-202ENST00000400053 C1orf100Q5SVJ3 147 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 FHL5Q5TD97 284 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 C19orf48Q6RUI8 117 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 C9orf40Q8IXQ3 194 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 LINC00469Q8N7U9 141 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 OR51B2Q9Y5P1 312 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 ZDBF2Q9HCK1 2354 aa7.66□□□□□ -1.18
PTPRM-202ENST00000400053 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 NGFRP08138 427 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 OTX1P32242 354 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-202ENST00000400053 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-202ENST00000400053 ZNF721Q8TF20 911 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 LSM10Q969L4 123 aaKnown RBP7.65□□□□□ -1.18
PTPRM-202ENST00000400053 KIR2DL4Q99706 377 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 VCX2Q9H322 139 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 LPAR2Q9HBW0 351 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 SOX8P57073 446 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 PSG9Q00887 426 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 KLRB1Q12918 225 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 SLC22A18ASQ8N1D0 253 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 SOSTQ9BQB4 213 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 OR2H1Q9GZK4 316 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 UBTD1Q9HAC8 227 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 A0A1W2PQM1 296 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 NPIPB9F8W1W9 429 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 HLA-DRB1P01911 266 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 SCTP09683 121 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 DANCRP0C864 163 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 NPBWR2P48146 333 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 RBM11P57052 281 aaKnown RBP7.65□□□□□ -1.18
PTPRM-202ENST00000400053 MEF2CQ06413 473 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-202ENST00000400053 C2orf83Q53S99 150 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 ATOH7Q8N100 152 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 AQP3Q92482 292 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 TMEM45BQ96B21 275 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 TMEM222Q9H0R3 208 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 FAM206AQ9NX38 181 aa7.65□□□□□ -1.18
PTPRM-202ENST00000400053 H7C1H1 209 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 DXOO77932 396 aaKnown RBP7.65□□□□□ -1.19
PTPRM-202ENST00000400053 C10orf126Q8N4M7 172 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 DEFB124Q8NES8 71 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 C19orf24Q9BVV8 132 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 WDR81Q562E7 1941 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 EFEMP2O95967 443 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 GAB4Q2WGN9 574 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 TPRX1Q8N7U7 411 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.19
PTPRM-202ENST00000400053 ALKBH7Q9BT30 221 aaPredicted RBP7.65□□□□□ -1.19
PTPRM-202ENST00000400053 H7C2G1 150 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 APELAP0DMC3 54 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 ZNF708P17019 499 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 OR10AG1Q8NH19 301 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 WDR90Q96KV7 1748 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 JKAMPQ9P055 326 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 SLC25A10Q9UBX3 287 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 CACNA1GO43497 2377 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 SDK2Q58EX2 2172 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 AGFG2O95081 481 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 FOLR2P14207 255 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 CA7P43166 264 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 C3AR1Q16581 482 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 FBXW9Q5XUX1 488 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 ST6GALNAC3Q8NDV1 305 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 SFXN3Q9BWM7 321 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 CEACAM18A8MTB9 384 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 KLF4O43474 513 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 EGR1P18146 543 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 SPEM2Q0P670 501 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 P2RY6Q15077 328 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 IBA57Q5T440 356 aaKnown RBP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 SPINK14Q6IE38 97 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 TAF15Q92804 592 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 TNFRSF19Q9NS68 423 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 A0A1W2PPE3 182 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 CD8AP01732 235 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 IL4P05112 153 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 CCL3P10147 92 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 AGAP20933 346 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 GLIPR1P48060 266 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 RNFT1Q5M7Z0 435 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 DNLZQ5SXM8 178 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 DNM1P46Q6ZS02 220 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms