RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 WDR34Q96EX3 536 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 ATG2BQ96BY7 2078 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 MAP1LC3B2A6NCE7 125 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 HYPMO75409 117 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 CEACAM4O75871 244 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 MAP1LC3BQ9GZQ8 125 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 MUC21A0A140T8X8 626 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 LAIR2Q6ISS4 152 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 CBLN3Q6UW01 205 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 FAM57AQ8TBR7 257 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 DYNLT3P51808 116 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 ISOC2Q96AB3 205 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 TMEM160Q9NX00 188 aa9.47□□□□□ -0.89
CACNA1C-216ENST00000399638 A0A0B4J2E0 115 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 A0A1B0GX12 115 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 FAM157CP0CG43 387 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 C5orf47Q569G3 176 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 PPP1R1CQ8WVI7 109 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 MRPL16Q9NX20 251 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 LOC102723996A0A087X1L8 192 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 A0A0G2JLM5 398 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 TMEM272A0A1B0GTI8 110 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 HIST1H1DP16402 221 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 TMEM33P57088 247 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 TBR1Q16650 682 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 MTURNQ8N3F0 131 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 OR1K1Q8NGR3 316 aa9.46□□□□□ -0.89
CACNA1C-216ENST00000399638 DUXBA0A1W2PPF3 345 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 H3BTX0 84 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 SPSB2Q99619 263 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF107Q9UII5 783 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 GREB1LQ9C091 1923 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 CEACAM18A8MTB9 384 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 KBTBD11O94819 623 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 SLC25A45Q8N413 288 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 SPSB4Q96A44 273 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 FGF5P12034 268 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 DSCR9P59020 149 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 ERVK11-1P61568 191 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 HLA-DRB3P79483 266 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 CD200R1LQ6Q8B3 271 aa9.46□□□□□ -0.9
CACNA1C-216ENST00000399638 IGHV3-64A0A075B6Q5 118 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 NDUFS5O43920 106 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 PGA3P0DJD8 388 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 BHLHA9Q7RTU4 235 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 GCSAMQ8N6F7 178 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF501Q96CX3 271 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 MPTX1A8MV57 137 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 CD99P14209 185 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 IL24Q13007 206 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 LEAP2Q969E1 77 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 PAXXQ9BUH6 204 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 NPIPB11E5RHQ5 1161 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 SIGLEC7Q9Y286 467 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 STARD10Q9Y365 291 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 ZDBF2Q9HCK1 2354 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 SLC25A20O43772 301 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 PIGYQ3MUY2 71 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 LINC00303Q3SY05 128 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 SLC25A33Q9BSK2 321 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 A0A1W2PQF6 199 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 CSRP1P21291 193 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 OR5C1Q8NGR4 320 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 FRRS1LQ9P0K9 344 aa9.45□□□□□ -0.9
CACNA1C-216ENST00000399638 IGLV3-16A0A075B6K0 115 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 UPK3AO75631 287 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF345Q14585 488 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ZDHHC22Q8N966 263 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ALG14Q96F25 216 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 ALKBH7Q9BT30 221 aaPredicted RBP9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 S4R3C0 116 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 LY75O60449 1722 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 HPXP02790 462 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 GATA4P43694 442 aa9.44□□□□□ -0.9
CACNA1C-216ENST00000399638 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms