RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 R3HDM4Q96D70 268 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 ASCL3Q9NQ33 180 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 SPRY3O43610 288 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 ENSAO43768 121 aaKnown RBP12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 LINC00614P0C842 121 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 ZNF83P51522 516 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TDGF1P3P51864 188 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 MMD2Q8IY49 270 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 COMMD5Q9GZQ3 224 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 PROB1E7EW31 1015 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 DNPH1O43598 174 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TRIP6Q15654 476 aaKnown RBP12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TMEM256Q8N2U0 113 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TM2D1Q9BX74 207 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TTTY12Q9BZ98 90 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TMEM167BQ9NRX6 74 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 COX5BP10606 129 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 PPOXP50336 477 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 TMEM242Q9NWH2 141 aa12.46□□□□□ -0.41
RPRD1A-202ENST00000399022 ZNF407Q9C0G0 2248 aa12.46□□□□□ -0.42
RPRD1A-202ENST00000399022 FHL1Q13642 323 aa12.46□□□□□ -0.42
RPRD1A-202ENST00000399022 OR2T6Q8NHC8 308 aa12.46□□□□□ -0.42
RPRD1A-202ENST00000399022 ZNF319Q9P2F9 582 aa12.46□□□□□ -0.42
RPRD1A-202ENST00000399022 AKAP6Q13023 2319 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 PLXNA4Q9HCM2 1894 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 OR5B21A6NL26 309 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 C1QTNF9BB2RNN3 333 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 NPSP0C0P6 89 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 LYL1P12980 280 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 C12orf54Q6X4T0 127 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 OR51G1Q8NGK1 321 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 C18orf12Q96KH6 178 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 MAP1LC3CQ9BXW4 147 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 PLXNA2O75051 1894 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 TRAV17A0A0B4J275 112 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 EFNA2O43921 213 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 AGFG2O95081 481 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 CLPSP04118 112 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 FAM19A2Q8N3H0 131 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 THADAQ6YHU6 1953 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 A0A0G2JMM0 328 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 A0A1W2PPB8 328 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 A0A1W2PRS3 328 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 KIR3DP1A8MWS1 328 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 MKRN2OSH3BPM6 223 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 GBGT1Q8N5D6 347 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 PXMP4Q9Y6I8 212 aa12.45□□□□□ -0.42
RPRD1A-202ENST00000399022 RHBDL1O75783 438 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 SLC25A5P05141 298 aaKnown RBP12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 UCP1P25874 307 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 TSPAN7P41732 249 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 LRRC75BQ2VPJ9 315 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 SMIM21Q3B7S5 101 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 MIC13Q5XKP0 118 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 TEX38Q6PEX7 206 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 CALHM1Q8IU99 346 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 CLDN16Q9Y5I7 305 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 MPC1Q9Y5U8 109 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 A0A1B0GW64 132 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 HLA-DQA1P01909 254 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 KLF3P57682 345 aaPredicted RBP12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 IL36RNQ9UBH0 155 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 SPAARA0A1B0GVQ0 90 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 M0R296 226 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 WISP1O95388 367 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ZNF137PP52743 207 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 PGPEP1LA6NFU8 196 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ZNF207O43670 478 aaKnown RBP12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ZG16O60844 167 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 TNFSF13O75888 250 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ARL14EPLP0DKL9 152 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ADMP35318 185 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 BPIFB3P59826 476 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ERHP84090 104 aaKnown RBP12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 SLC25A34Q6PIV7 304 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 MDP1Q86V88 176 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 Q8IYB0 196 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 FAM89BQ8N5H3 189 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 BLNKQ8WV28 456 aa12.44□□□□□ -0.42
RPRD1A-202ENST00000399022 ZIC3O60481 467 aa12.43□□□□□ -0.42
RPRD1A-202ENST00000399022 ATP5G3P48201 142 aa12.43□□□□□ -0.42
RPRD1A-202ENST00000399022 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
RPRD1A-202ENST00000399022 PPP1R32Q7Z5V6 425 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms