RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 IQCF6A8MYZ5 107 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 SMIM17P0DL12 118 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 ZNF880Q6PDB4 577 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 OR1L6Q8NGR2 347 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 MS4A10Q96PG2 267 aa12.09□□□□□ -0.47
PCDHGA11-201ENST00000398587 PINLYPA6NC86 204 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 B9A039 149 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 HYPMO75409 117 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 DANCRP0C864 163 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 RD3LP0DJH9 198 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM57AQ8TBR7 257 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 SLC31A2O15432 143 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 KBTBD11O94819 623 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 CRISP2P16562 243 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 CD40P25942 277 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 HTR1DP28221 377 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 GAMTQ14353 236 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 ARL2-SNX15V9GYD0 113 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 SS18L1O75177 396 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 CRYGSP22914 178 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 TCL1AP56279 114 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 KLRB1Q12918 225 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 ABHD17AQ96GS6 310 aa12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 YTHDF2Q9Y5A9 579 aaKnown RBP12.08□□□□□ -0.48
PCDHGA11-201ENST00000398587 LOC102723971A0A1B0GUV8 181 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 IGSF23A1L1A6 192 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 PQLC2Q6ZP29 291 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 TMEM186Q96B77 213 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 PAXXQ9BUH6 204 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 COL8A1P27658 744 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 PMS2P11Q13670 270 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 TOMM20LQ6UXN7 152 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 LEAP2Q969E1 77 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 LPAR2Q9HBW0 351 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 ANAPC1Q9H1A4 1944 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 MSGN1A6NI15 193 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 DLL1O00548 723 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 GGNQ86UU5 652 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 TLNRD1Q9H1K6 362 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 TTC28Q96AY4 2481 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 P01737 135 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 LINC00869P0C866 280 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 MUC15Q8N387 334 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 OR4C13Q8NGP0 309 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 MIOXQ9UGB7 285 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 HILPDAQ9Y5L2 63 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 KCNMB2Q9Y691 235 aa12.07□□□□□ -0.48
PCDHGA11-201ENST00000398587 SLC25A17O43808 307 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF273Q14593 569 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 P2RX4Q99571 388 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 PPIAL4CA0A0B4J2A2 164 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 CELA3BP08861 270 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 PPIAL4GP0DN37 164 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 WNT5AP41221 380 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 COMPP49747 757 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 BMPERQ8N8U9 685 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 RAB24Q969Q5 203 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 VAMP8Q9BV40 100 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 METTL1Q9UBP6 276 aaKnown RBP12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 MIC13Q5XKP0 118 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 HIGD1AQ9Y241 93 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 NOTCH4Q99466 2003 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 IGHV3-21A0A0B4J1V1 117 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF253O75346 499 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 OR5R1Q8NH85 324 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 NABP1Q96AH0 204 aa12.06□□□□□ -0.48
PCDHGA11-201ENST00000398587 MYLKQ15746 1914 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 APOBEC3AP31941 199 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 AMTP48728 403 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 MEOX2P50222 304 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 CLEC2AQ6UVW9 174 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 PSMG3Q9BT73 122 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 SH3BGRL3Q9H299 93 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 GBF1Q92538 1859 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 HIST1H1EP10412 219 aaKnown RBP12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 MPZP25189 248 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 NCMAPQ5T1S8 102 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF385CQ66K41 422 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF788Q6ZQV5 615 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 LDLRAD3Q86YD5 345 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM90A1Q86YD7 464 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM122AQ96E09 287 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 TP53BP1Q12888 1972 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 ECSCRQ19T08 205 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 HCP5Q6MZN7 132 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF430Q9H8G1 570 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms