RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SNIP1Q8TAD8 396 aaKnown RBP15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 ZNF71Q9NQZ8 489 aaPredicted RBP15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 C17orf98A8MV24 154 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 H3BQ15 152 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 CLDN1O95832 211 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 KITLGP21583 273 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 PLA2G5P39877 138 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 BRWD1-AS2P59051 145 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 LTC4SQ16873 150 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 OR8G2PQ6IF36 304 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 RAB39BQ96DA2 213 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 CEP250Q9BV73 2442 aa15.34■□□□□ 0.05
CHRFAM7A-202ENST00000397827 S1PR2O95136 353 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 IGLV1-44P01699 117 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LCN15Q6UWW0 184 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PLPPR2Q96GM1 343 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 GNG13Q9P2W3 67 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PROCRQ9UNN8 238 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 FGF8P55075 233 aaPredicted RBP15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 GAGE1Q13065 139 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 EDDM3AQ14507 147 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SEM1Q6ZVN7 128 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SSX7Q7RTT5 188 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 OR2Z1Q8NG97 314 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LRRC29Q8WV35 223 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 OR4C12Q96R67 309 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RBKSQ9H477 322 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 DUSP13Q9UII6 198 aa15.33■□□□□ 0.04
CHRFAM7A-202ENST00000397827 HBG1P69891 147 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 HBG2P69892 147 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF726P1Q15940 193 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 MSMPQ1L6U9 139 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF506Q5JVG8 444 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LRP11Q86VZ4 500 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 CD177Q8N6Q3 437 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 BHLHA15Q7RTS1 189 aaPredicted RBP15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 OR13D1Q8NGV5 346 aa15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RBMXL1Q96E39 390 aaKnown RBP15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ACTR3CQ9C0K3 210 aaPredicted RBP15.32■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SMG1Q96Q15 3661 aaKnown RBP15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 UBE2L5PA0A1B0GUS4 154 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ODAMA1E959 279 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZFP92A6NM28 416 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 CGAP01215 116 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 HBE1P02100 147 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 CD55P08174 381 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RPS16P62249 146 aaKnown RBP15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 EIF4EBP1Q13541 118 aaPredicted RBP15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LRRC75BQ2VPJ9 315 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SMIM21Q3B7S5 101 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 DPPA3Q6W0C5 159 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF665Q9H7R5 613 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 CLN8Q9UBY8 286 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 AHRRA9YTQ3 701 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 EGR1P18146 543 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ELLP55199 621 aaPredicted RBP15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF429Q86V71 674 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PRR7Q8TB68 274 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF292O60281 2723 aa15.31■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LINC00473A8K010 186 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 AMBPP02760 352 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 HSPB1P04792 205 aaKnown RBP15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SLC38A11Q08AI6 406 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RPRMLQ8N4K4 120 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZBTB34Q8NCN2 500 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 WDR61Q9GZS3 305 aaKnown RBP15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PSG11Q9UQ72 335 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF318Q5VUA4 2279 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RPLP1P05386 114 aaKnown RBP15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF83P51522 516 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 CATR1Q13166 79 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SPINK9Q5DT21 86 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ARSJQ5FYB0 599 aaPredicted RBP15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 MBNL2Q5VZF2 373 aaKnown RBP15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZDHHC16Q969W1 377 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 AKAP13Q12802 2813 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SPRNQ5BIV9 151 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZNF787Q6DD87 383 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 HSPB7Q9UBY9 170 aa15.3■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LRRC30A6NM36 301 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PRDX2P32119 198 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 DLK1P80370 383 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RCC1LQ96I51 464 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 FAM210BQ96KR6 192 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 HIPK2Q9H2X6 1198 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 PITPNC1Q9UKF7 332 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 SLC25A15Q9Y619 301 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 LOC102723971A0A1B0GUV8 181 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 FAM90A26D6RGX4 464 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 ZG16O60844 167 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 IGHV3-13P01766 116 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 IGHV3-7P01780 117 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 OR4A8P0C604 315 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 P0C879 139 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 TMEM14EPQ6UXP3 125 aa15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RNASEH2CQ8TDP1 164 aaKnown RBP15.29■□□□□ 0.04
CHRFAM7A-202ENST00000397827 IGHV3OR15-7A0A075B7D8 119 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 IFNL4K9M1U5 179 aa15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 RBMXL2O75526 392 aaKnown RBP15.28■□□□□ 0.04
CHRFAM7A-202ENST00000397827 P2RY6Q15077 328 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms