RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 BRI3O95415 125 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 RCC1P18754 421 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MDKP21741 143 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 TBR1Q16650 682 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 FGFRL1Q8N441 504 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 GATAD1Q8WUU5 269 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MAFIPQ8WZ33 124 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MALSU1Q96EH3 234 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 H0YL77 283 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF205O95201 554 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 LOXL3P58215 753 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 EWSR1Q01844 656 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ADIPOQQ15848 244 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 C2orf68Q2NKX9 166 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 SOHLH1Q5JUK2 328 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 C20orf204Q6ZNR8 217 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF818PQ6ZRF7 136 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF48Q96MX3 618 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 PPP1R14DQ9NXH3 145 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 UBR5O95071 2799 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 A8MV72 311 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MORN2Q502X0 79 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 RNASE12Q5GAN4 147 aaKnown RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ADAD2Q8NCV1 583 aaKnown RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 OR4C13Q8NGP0 309 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MS4A3Q96HJ5 214 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 OR2V2Q96R30 315 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 C12orf49Q9H741 205 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 KCNJ16Q9NPI9 418 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MANBALQ9NQG1 85 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 AMMECR1Q9Y4X0 333 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 FAM74A7A6NL05 159 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 M0R1W7 72 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 IGHV3-9P01782 118 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 FABP6P51161 128 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 LRRC75BQ2VPJ9 315 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 BSXQ3C1V8 233 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 LYZL2Q7Z4W2 148 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 TEX29Q8N6K0 151 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 OR2Z1Q8NG97 314 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 CCL28Q9NRJ3 127 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 SMCO4Q9NRQ5 59 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 LAMA1P25391 3075 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 A6NL46 340 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MT-ND4LP03901 98 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 SCTP09683 121 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 FOXF2Q12947 444 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ETFRF1Q6IPR1 90 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 COMMD7Q86VX2 200 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MMD2Q8IY49 270 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 TMED6Q8WW62 240 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 IGFBPL1Q8WX77 278 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 SMIM12Q96EX1 92 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 RAB1BQ9H0U4 201 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MIOXQ9UGB7 285 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 RFC3P40938 356 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 HABP2Q14520 560 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF506Q5JVG8 444 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 OR10P1Q8NGE3 313 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM167AQ8TBQ9 72 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 PPIAL4AQ9Y536 164 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 IGSF11Q5DX21 431 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 AKR1C8PQ5T2L2 129 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 Q6ZPA2 131 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 ST6GALNAC6Q969X2 333 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 SLC35E1Q96K37 410 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 TP53RKQ96S44 253 aa4.88□□□□□ -1.63
PTPRD-206ENST00000397617 MDFIC2A0A1B0GVS7 189 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 EPHA1P21709 976 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 COTL1Q14019 142 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 PVRIGQ6DKI7 326 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 KCNK15Q9H427 330 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 UNC80Q8N2C7 3258 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 FRYLO94915 3013 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 MEIS3P1A6NDR6 274 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 SIX6O95475 246 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 FOLR2P14207 255 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 TUSC1Q2TAM9 212 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 ALKAL2Q6UX46 152 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM14BQ9NUH8 114 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 CACNG5Q9UF02 275 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 OR14J1Q9UGF5 321 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 KCNS2Q9ULS6 477 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 ITPR3Q14573 2671 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 IGFBP2P18065 325 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 C2orf83Q53S99 150 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 MINOS1Q5TGZ0 78 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 OR1L8Q8NGR8 309 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 PLPPR1Q8TBJ4 325 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 GAR1Q9NY12 217 aaKnown RBP4.87□□□□□ -1.63
PTPRD-206ENST00000397617 CLEC5AQ9NY25 188 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 MINOS1-NBL1R4GNA1 71 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 A0A1W2PR80 420 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 CLN5O75503 358 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 KBTBD11O94819 623 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms