RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 BRWD1-AS2P59051 145 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 TAS2R31P59538 309 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 EBI3Q14213 229 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 DUSP18Q8NEJ0 188 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 OR4S2Q8NH73 311 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 DUX5Q96PT3 197 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 POMT1Q9Y6A1 747 aa18.91■□□□□ 0.62
TSPAN4-203ENST00000397397 C3orf85A0A1B0GTC6 90 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 A6NDX4 124 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 DNAJC9-AS1A6NH13 148 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 CRYZL1O95825 349 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 IGKV1-16P04430 117 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 H2AFB2P0C5Z0 115 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 SLC25A42Q86VD7 318 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 SGPP2Q8IWX5 399 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 TMEM86BQ8N661 226 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 TCTEX1D1Q8N7M0 179 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 FLYWCH2Q96CP2 140 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 PITPNC1Q9UKF7 332 aa18.9■□□□□ 0.62
TSPAN4-203ENST00000397397 RAMP3O60896 148 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 PTTG1O95997 202 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 RPS16P62249 146 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 SLC9A3R2Q15599 337 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 DHRS7BQ6IAN0 325 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 CCBE1Q6UXH8 406 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 TMEM219Q86XT9 240 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 OR4C13Q8NGP0 309 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 CD300LFQ8TDQ1 290 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 RITA1Q96K30 269 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 ESM1Q9NQ30 184 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 VPREB3Q9UKI3 123 aa18.89■□□□□ 0.61
TSPAN4-203ENST00000397397 H0Y980 276 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 RBFOX2O43251 390 aaKnown RBP eCLIP18.88■□□□□ 0.612e-6■■■■□ 21.7
TSPAN4-203ENST00000397397 PEX14O75381 377 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 SPNP16150 400 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 ANXA7P20073 488 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 HILS1P60008 231 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 TMEM128Q5BJH2 165 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 C11orf88Q6PI97 169 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 PLET1Q6UQ28 207 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 Q8N6K4 173 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 JMJD8Q96S16 334 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 TP53RKQ96S44 253 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 BEX1Q9HBH7 125 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 KCNIP3Q9Y2W7 256 aa18.88■□□□□ 0.61
TSPAN4-203ENST00000397397 SHOXO15266 292 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 OR5AC1P0C628 307 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 LPAR6P43657 344 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 RGS21Q2M5E4 152 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 SP6Q3SY56 376 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 TMEM177Q53S58 311 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 HARBI1Q96MB7 349 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 SLC25A33Q9BSK2 321 aa18.87■□□□□ 0.61
TSPAN4-203ENST00000397397 TCF21O43680 179 aa18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 RAB25P57735 213 aa18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 UBE2MP61081 183 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 DHODHQ02127 395 aa18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 ZNF585BQ52M93 769 aa18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 RBM14Q96PK6 669 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 RNF5Q99942 180 aa18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 CHIAQ9BZP6 476 aa18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 FAM212BQ9NTI7 297 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-203ENST00000397397 CUBNO60494 3623 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 A0A0A6YYJ9 748 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 B3GALNT1O75752 331 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 OR2F2O95006 317 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 HPRT1P00492 218 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 SERPINE2P07093 398 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 VSIG10L2P0DP72 767 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 VAMP1P23763 118 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 CNTFRP26992 372 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 SUPT4H1P63272 117 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 PPP1R1AQ13522 171 aa18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 OSR1Q8TAX0 266 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 TSNAXQ99598 290 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-203ENST00000397397 S1PR2O95136 353 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 IFNA2P01563 188 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 OR4E1P0C645 316 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 ANXA3P12429 323 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 F2RL1P55085 397 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 MMDQ15546 238 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 C4orf46Q504U0 113 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 LIAT1Q6ZQX7 453 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 ZFAND2BQ8WV99 257 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 GALNT14Q96FL9 552 aa18.84■□□□□ 0.61
TSPAN4-203ENST00000397397 NCBP2LA6PVI3 153 aaKnown RBP18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 CLDN34H7C241 214 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 UCP1P25874 307 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 LGALS7P47929 136 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 TRIM16LQ309B1 348 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 C16orf82Q7Z2V1 217 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 OR8H1Q8NGG4 311 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 TMEM222Q9H0R3 208 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 ALX4Q9H161 411 aaPredicted RBP18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 PLEKHA2Q9HB19 425 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 C1RLQ9NZP8 487 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 MOB4Q9Y3A3 225 aa18.83■□□□□ 0.61
TSPAN4-203ENST00000397397 SRRM4A7MD48 611 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 INMT-MINDY4F8WBC2 141 aa18.83■□□□□ 0.6
TSPAN4-203ENST00000397397 NBR2O15453 112 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms