RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ANXA10Q9UJ72 324 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 GPR132Q9UNW8 380 aa11.61□□□□□ -0.55
SEC13-208ENST00000397109 FABP7O15540 132 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 YPEL1O60688 119 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 PMP2P02689 132 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 FCGR3AP08637 254 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 DHODHQ02127 395 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 EBI3Q14213 229 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 HMGN3Q15651 99 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 ZFAND1Q8TCF1 268 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 WIPF2Q8TF74 440 aaPredicted RBP11.6□□□□□ -0.55
SEC13-208ENST00000397109 RTN4IP1Q8WWV3 396 aaPredicted RBP11.6□□□□□ -0.55
SEC13-208ENST00000397109 YPEL2Q96QA6 119 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 SEC22CQ9BRL7 303 aa11.6□□□□□ -0.55
SEC13-208ENST00000397109 SLC31A2O15432 143 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 FGF16O43320 207 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 IGKV1D-33P01593 117 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 IGKV1-33P01594 117 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 AMY1AP04745 511 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 CXCL3P19876 107 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 CD1BP29016 333 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 REG1BP48304 166 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 ARPC4P59998 168 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 FBLN7Q53RD9 439 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 TMEM128Q5BJH2 165 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
SEC13-208ENST00000397109 DHRS11Q6UWP2 260 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 LYG2Q86SG7 212 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 TGIF2LXQ8IUE1 241 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 C12orf45Q8N5I9 185 aaPredicted RBP11.59□□□□□ -0.55
SEC13-208ENST00000397109 OR2AK2Q8NG84 335 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 GON7Q9BXV9 100 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 NECAP2Q9NVZ3 263 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 MGAT4CQ9UBM8 478 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 VWFP04275 2813 aa11.59□□□□□ -0.55
SEC13-208ENST00000397109 CMYA5Q8N3K9 4069 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 DIRAS3O95661 229 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 TSPAN15O95858 294 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 CTXN2P0C2S0 81 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 ZNF134P52741 427 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 HNF4GQ14541 408 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 TMEM95Q3KNT9 176 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
SEC13-208ENST00000397109 NDUFA11Q86Y39 141 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 OR52L2PQ8NGH6 319 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 OR2T10Q8NGZ9 312 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 ABHD14AQ9BUJ0 271 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 EHFQ9NZC4 300 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 VSIG4Q9Y279 399 aa11.58□□□□□ -0.56
SEC13-208ENST00000397109 RGS13O14921 159 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 DUS4LO95620 317 aaKnown RBP11.57□□□□□ -0.56
SEC13-208ENST00000397109 CD28P10747 220 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 C4BPBP20851 252 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 ZBTB25P24278 435 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 PPP1CCP36873 323 aaKnown RBP11.57□□□□□ -0.56
SEC13-208ENST00000397109 HLA-DRB3P79483 266 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 DHRS2Q13268 280 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 KIR2DS1Q14954 304 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 C9orf152Q5JTZ5 239 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 LIN54Q6MZP7 749 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 LYG1Q8N1E2 194 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 OR5AU1Q8NGC0 362 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 FAM110DQ8TAY7 271 aaPredicted RBP11.57□□□□□ -0.56
SEC13-208ENST00000397109 MITD1Q8WV92 249 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 MRGPRFQ96AM1 343 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 EAF1Q96JC9 268 aaPredicted RBP11.57□□□□□ -0.56
SEC13-208ENST00000397109 PHB2Q99623 299 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 IGHV3-72A0A0B4J1Y9 119 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 TRDCB7Z8K6 153 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 SLC22A5O76082 557 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 MOSP00540 346 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 NKX2-5P52952 324 aaPredicted RBP11.57□□□□□ -0.56
SEC13-208ENST00000397109 UCP3P55916 312 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 GNMTQ14749 295 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 AADACL3Q5VUY0 350 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 TMED4Q7Z7H5 227 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 OR8H1Q8NGG4 311 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 IL1F10Q8WWZ1 152 aa11.57□□□□□ -0.56
SEC13-208ENST00000397109 ZNF230Q9UIE0 474 aaPredicted RBP11.57□□□□□ -0.56
SEC13-208ENST00000397109 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 HLA-AP01891 365 aaKnown RBP11.56□□□□□ -0.56
SEC13-208ENST00000397109 OPN1MWP04001 364 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 OPN1MW2P0DN77 364 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 OPN1MW3P0DN78 364 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 OR5H8P0DN80 308 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 FGL1Q08830 312 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 ZNF660Q6AZW8 331 aaPredicted RBP11.56□□□□□ -0.56
SEC13-208ENST00000397109 C5orf24Q7Z6I8 188 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 Q8N6K4 173 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 OR4A4PQ8NGN8 299 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 OR2T35Q8NGX2 323 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms