RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PAX2Q02962 417 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 NDUFA3O95167 84 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 GZMHP20718 246 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 SRD5A2P31213 254 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 PRICKLE4Q2TBC4 344 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 PDFQ9HBH1 243 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 PLSCR2Q9NRY7 297 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 DLL1O00548 723 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 LRRC61Q9BV99 259 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 MEGF9Q9H1U4 602 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 CBLN1P23435 193 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 RPL31P62899 125 aaKnown RBP8.99□□□□□ -0.97
COL4A4-201ENST00000396625 LINC00518Q8N0U6 118 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 CHST5Q9GZS9 411 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 ZNF576Q9H609 170 aa8.99□□□□□ -0.97
COL4A4-201ENST00000396625 TCRBV5S1A1TA0A578 114 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 ASPDHA6ND91 283 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 HPRT1P00492 218 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 COX11Q9Y6N1 276 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
COL4A4-201ENST00000396625 PATE4P0C8F1 98 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 HOXA5P20719 270 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 GLIPR1P48060 266 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 NOVP48745 357 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 PRRT4C9JH25 899 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 CTSVO60911 334 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 EML2O95834 649 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 SRSF12Q8WXF0 261 aaKnown RBP8.98□□□□□ -0.97
COL4A4-201ENST00000396625 SIGMAR1Q99720 223 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 TMEM131Q92545 1883 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 SLC25A2Q9BXI2 301 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 ZNF645Q8N7E2 425 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 CFDP00746 253 aaPredicted RBP8.98□□□□□ -0.97
COL4A4-201ENST00000396625 SELENOTP62341 195 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 C10orf111Q8N326 155 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 MUC4Q99102 2169 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 OR2H1Q9GZK4 316 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 CXorf51AA0A1B0GTR3 108 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 FXYD1O00168 92 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 COL10A1Q03692 680 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 ZNF562Q6V9R5 426 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 VSTM2LQ96N03 204 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 ZNF430Q9H8G1 570 aaPredicted RBP8.98□□□□□ -0.97
COL4A4-201ENST00000396625 KLK13Q9UKR3 277 aa8.98□□□□□ -0.97
COL4A4-201ENST00000396625 A0A1W2PPE3 182 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 SIGLEC14Q08ET2 396 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 STRCP1A6NGW2 1772 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 FAM106CPP0CH98 169 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 SPINK14Q6IE38 97 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 ST6GALNAC6Q969X2 333 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 DUX5Q96PT3 197 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 SDHCQ99643 169 aaPredicted RBP8.97□□□□□ -0.97
COL4A4-201ENST00000396625 ARRDC1-AS1Q9H2J1 176 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 RNF7Q9UBF6 113 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 MALP21145 153 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 KIAA1644Q3SXP7 199 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 THSD4Q6ZMP0 1018 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 AMER3Q8N944 861 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 FAM71F2Q6NXP2 309 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 TUBD1Q9UJT1 453 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 RPL8P62917 257 aaKnown RBP8.97□□□□□ -0.97
COL4A4-201ENST00000396625 MIC13Q5XKP0 118 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 HCP5Q6MZN7 132 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 OR52M1Q8NGK5 317 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 BRCA1P38398 1863 aaKnown RBP8.97□□□□□ -0.97
COL4A4-201ENST00000396625 FCARP24071 287 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 STARD6P59095 220 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 H7C1H1 209 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 SNAI2O43623 268 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 CEACAM4O75871 244 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 VKORC1L1Q8N0U8 176 aa8.97□□□□□ -0.97
COL4A4-201ENST00000396625 GHRHP01286 108 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 A0A1B0GTL3 188 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 H0YL77 283 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 RPL36A-HNRNPH2H7BZ11 118 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 TNFSF14O43557 240 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 GCM2O75603 506 aaPredicted RBP8.96□□□□□ -0.97
COL4A4-201ENST00000396625 ISG15P05161 165 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 SMAD4Q13485 552 aaKnown RBP8.96□□□□□ -0.97
COL4A4-201ENST00000396625 LAMTOR1Q6IAA8 161 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 TMEM222Q9H0R3 208 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 SH3BGRL3Q9H299 93 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 LPAR2Q9HBW0 351 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 DNAJC4Q9NNZ3 241 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 HILPDAQ9Y5L2 63 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 CDC42EP2O14613 210 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 MYOGP15173 224 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 SSPNQ14714 243 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 CFAP161Q6P656 301 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 RNASEH2CQ8TDP1 164 aaKnown RBP8.96□□□□□ -0.97
COL4A4-201ENST00000396625 UBR3Q6ZT12 1888 aa8.96□□□□□ -0.97
COL4A4-201ENST00000396625 C7orf66A4D0T2 115 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 PGPEP1LA6NFU8 196 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 CXCL2P19875 107 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 LINC00615Q96LM1 132 aaPredicted RBP8.96□□□□□ -0.98
COL4A4-201ENST00000396625 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 MYF5P13349 255 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 LSM6P62312 80 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms