RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 SNRNP40Q96DI7 357 aaKnown RBP11.15□□□□□ -0.62
GREB1-206ENST00000396123 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.62
GREB1-206ENST00000396123 GAS1P54826 345 aa11.15□□□□□ -0.62
GREB1-206ENST00000396123 SLC35E4Q6ICL7 350 aa11.15□□□□□ -0.62
GREB1-206ENST00000396123 ANK1P16157 1881 aa11.15□□□□□ -0.63
GREB1-206ENST00000396123 CEP250Q9BV73 2442 aa11.15□□□□□ -0.63
GREB1-206ENST00000396123 NDUFA2O43678 99 aa11.15□□□□□ -0.63
GREB1-206ENST00000396123 MT-ND6P03923 174 aa11.15□□□□□ -0.63
GREB1-206ENST00000396123 CELA3AP09093 270 aa11.15□□□□□ -0.63
GREB1-206ENST00000396123 RTBDNQ9BSG5 229 aaPredicted RBP11.15□□□□□ -0.63
GREB1-206ENST00000396123 PCGF1Q9BSM1 259 aa11.15□□□□□ -0.63
GREB1-206ENST00000396123 ZNF646O15015 1829 aaPredicted RBP11.15□□□□□ -0.63
GREB1-206ENST00000396123 NPIPB7O75200 414 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 PRDM6Q9NQX0 595 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 DOCK4Q8N1I0 1966 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 A8MWL6 223 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 DOCK6Q96HP0 2047 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 PRR32B1ATL7 298 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 SNRPCP09234 159 aaKnown RBP11.14□□□□□ -0.63
GREB1-206ENST00000396123 CALHM1Q8IU99 346 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 GBGT1Q8N5D6 347 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 SCNM1Q9BWG6 230 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 LPAR2Q9HBW0 351 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 GFRA3O60609 400 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 NAT1P18440 290 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 PAFAH1B2P68402 229 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 Q1RN00 199 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 VN1R17PQ8TDU5 208 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
GREB1-206ENST00000396123 C1QTNF5Q9BXJ0 243 aa11.14□□□□□ -0.63
GREB1-206ENST00000396123 RTTNQ86VV8 2226 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 IFNL4K9M1U5 179 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 M0QZK8 103 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 GGCTO75223 188 aaKnown RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 ZNF883P0CG24 379 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 ZNF137PP52743 207 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 IBA57Q5T440 356 aaKnown RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 CLEC2AQ6UVW9 174 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 ZNF837Q96EG3 531 aaPredicted RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 ZNF430Q9H8G1 570 aaPredicted RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 LNP1A1A4G5 178 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 PRNTQ86SH4 94 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 PLSCR2Q9NRY7 297 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 ACAA1P09110 424 aaPredicted RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 NAT2P11245 290 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 SSTR5P35346 364 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 SLC35B1P78383 322 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 REPIN1Q9BWE0 567 aaKnown RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 RTN4RQ9BZR6 473 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 FBLN5Q9UBX5 448 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 A0A087WV48 116 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 TMEM30BQ3MIR4 351 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 SFXN3Q9BWM7 321 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 METTL1Q9UBP6 276 aaKnown RBP11.13□□□□□ -0.63
GREB1-206ENST00000396123 HSPB8Q9UJY1 196 aa11.13□□□□□ -0.63
GREB1-206ENST00000396123 TGIF2-C20orf24A0A0A6YYL0 155 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 RNF222A6NCQ9 220 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 CBY3A6NI87 242 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 ZNF729A6NN14 1252 aaPredicted RBP11.12□□□□□ -0.63
GREB1-206ENST00000396123 EIF3GO75821 320 aaKnown RBP eCLIP11.12□□□□□ -0.63
GREB1-206ENST00000396123 COX6B1P14854 86 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 UCP1P25874 307 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 TBX15Q96SF7 602 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 RND2P52198 227 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 ABHD12Q8N2K0 398 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 SLC25A17O43808 307 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 TRAV14DV4A0A0A6YYC5 116 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 A8MXK9 166 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 DIRC3C9JPN6 131 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 KBTBD11O94819 623 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 UMODP07911 640 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 ZNF735P0CB33 412 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 ZNF343Q6P1L6 599 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 SHISA5Q8N114 240 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 FDCSPQ8NFU4 85 aa11.12□□□□□ -0.63
GREB1-206ENST00000396123 PLAUP00749 431 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 ARL14EPLP0DKL9 152 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 HIST1H2BAQ96A08 127 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 DNAJC4Q9NNZ3 241 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 RPRMQ9NS64 109 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 WNT9BO14905 357 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 RHBDL1O75783 438 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 C8orf88P0DMB2 117 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 EIF4E3Q8N5X7 224 aaKnown RBP11.11□□□□□ -0.63
GREB1-206ENST00000396123 SLC25A28Q96A46 364 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 PGPA6NDG6 321 aa11.11□□□□□ -0.63
GREB1-206ENST00000396123 LRRC75BQ2VPJ9 315 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms