RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TTC28Q96AY4 2481 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 RPLP1P05386 114 aaKnown RBP12.01□□□□□ -0.49
CLIP2-203ENST00000395060 OR10J1P30954 320 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 IER3P46695 156 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 PLP2Q04941 152 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 ARSJQ5FYB0 599 aaPredicted RBP12.01□□□□□ -0.49
CLIP2-203ENST00000395060 C5orf30Q96GV9 206 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 TECTBQ96PL2 329 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 FZR1Q9UM11 496 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
CLIP2-203ENST00000395060 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 CD82P27701 267 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 PDLIM4P50479 330 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 RNPS1Q15287 305 aaKnown RBP12.01□□□□□ -0.49
CLIP2-203ENST00000395060 H2BFWTQ7Z2G1 175 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 ZNF573Q86YE8 665 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 ZCCHC14Q8WYQ9 949 aaKnown RBP12.01□□□□□ -0.49
CLIP2-203ENST00000395060 SFRP2Q96HF1 295 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 RNF114Q9Y508 228 aa12.01□□□□□ -0.49
CLIP2-203ENST00000395060 LRP5LA4QPB2 252 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 AQP7O14520 342 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 SYNGR4O95473 234 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 CELA3BP08861 270 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FOLR3P41439 243 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 GABRA2P47869 451 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
CLIP2-203ENST00000395060 MIC13Q5XKP0 118 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 LRRC30A6NM36 301 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 LAMTOR5O43504 91 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 PSPNO60542 156 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 RAC2P15153 192 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 RAB4AP20338 218 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 SSTR5P35346 364 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 COLCA1Q6ZS62 124 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 BTF3L4Q96K17 158 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 EP300Q09472 2414 aaPredicted RBP12□□□□□ -0.49
CLIP2-203ENST00000395060 TCF21O43680 179 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 ACTL6BO94805 426 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 IGHEP01854 428 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 PMCHP20382 165 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 SRP14P37108 136 aaKnown RBP12□□□□□ -0.49
CLIP2-203ENST00000395060 WDR86Q86TI4 376 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 OCC1Q8TAD7 63 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
CLIP2-203ENST00000395060 FCN1O00602 326 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 CRISP2P16562 243 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 EDDM3AQ14507 147 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 RIPPLY2Q5TAB7 128 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 LINC00696Q6ZRV3 163 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 QTRT1Q9BXR0 403 aaKnown RBP11.99□□□□□ -0.49
CLIP2-203ENST00000395060 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 RIMS4Q9H426 269 aaPredicted RBP11.99□□□□□ -0.49
CLIP2-203ENST00000395060 ELOVL5Q9NYP7 299 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 TP53TG3Q9ULZ0 132 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 A0A1B0GWJ7 208 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 DLEU1O43261 78 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 MAGEA5P43359 124 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 SCCPDHQ8NBX0 429 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 Q8NFD4 153 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 VAMP8Q9BV40 100 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 HINT2Q9BX68 163 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 OR2J1Q9GZK6 312 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.99□□□□□ -0.49
CLIP2-203ENST00000395060 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 PSG11Q9UQ72 335 aa11.99□□□□□ -0.49
CLIP2-203ENST00000395060 ARFGEF3Q5TH69 2177 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 MARCH11A6NNE9 402 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 CLDN14O95500 239 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 TRA2AQ13595 282 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLIP2-203ENST00000395060 FXYD3Q14802 87 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 MMDQ15546 238 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 SPATA31B1PQ5VZV4 182 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 Q6P435 159 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 OR2Y1Q8NGV0 311 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 KCNE4Q8WWG9 221 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 MRPL18Q9H0U6 180 aaKnown RBP11.98□□□□□ -0.49
CLIP2-203ENST00000395060 CADP27708 2225 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 RRHO14718 337 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 SH2D1BO14796 132 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 WNT2P09544 360 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 CYB561P49447 251 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 SOX8P57073 446 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 MSMO1Q15800 293 aa11.98□□□□□ -0.49
CLIP2-203ENST00000395060 NINJ1Q92982 152 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms