RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 HCFC2Q9Y5Z7 792 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 TRAV17A0A0B4J275 112 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 ZNF32P17041 273 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 TBC1D29Q9UFV1 150 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 CT83Q5H943 113 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
USP49-203ENST00000394253 OR11G2Q8NGC1 345 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 OR10J3Q5JRS4 329 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 VN1R2Q8NFZ6 395 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 CADM4Q8NFZ8 388 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 OR51G1Q8NGK1 321 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 V9GYH0 126 aa11.7□□□□□ -0.54
USP49-203ENST00000394253 A0A1W2PP11 408 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 KLK2P20151 261 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 STARD6P59095 220 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 GRIFINA4D1Z8 144 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 IGHV3-13P01766 116 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 IGHV3-7P01780 117 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 ATOH1Q92858 354 aaPredicted RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 A0A0A6YYD5 115 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 H3BUT2 72 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 PPIAL4DF5H284 164 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 SYNGR3O43761 229 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 TNFRSF6BO95407 300 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 GPX4P36969 197 aaPredicted RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 HMGCLL1Q8TB92 370 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 LAMTOR2Q9Y2Q5 125 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 FAM90A26D6RGX4 464 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 TM4SF1P30408 202 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 RPL8P62917 257 aaKnown RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 ZNF729A6NN14 1252 aaPredicted RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 HYAL3O43820 417 aaPredicted RBP11.69□□□□□ -0.54
USP49-203ENST00000394253 ORMDL3Q8N138 153 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 ZNF645Q8N7E2 425 aa11.69□□□□□ -0.54
USP49-203ENST00000394253 C9orf172C9J069 976 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 DLL1O00548 723 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 PRSS12P56730 875 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 LINC00614P0C842 121 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 MMD2Q8IY49 270 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 TNFRSF14Q92956 283 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 PRF1P14222 555 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 RTN4RQ9BZR6 473 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 IL11RAQ14626 422 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 NDUFA3O95167 84 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 PRR35P0CG20 571 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 TMEM174Q8WUU8 243 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 CHST5Q9GZS9 411 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 SCN7AQ01118 1682 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 OBSL1O75147 1896 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 M0R2P5 195 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 TNFSF14O43557 240 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 PTP4A3O75365 173 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 RPL32P62910 135 aaKnown RBP11.68□□□□□ -0.54
USP49-203ENST00000394253 TMEM155Q4W5P6 130 aa11.68□□□□□ -0.54
USP49-203ENST00000394253 TMEFF2Q9UIK5 374 aaPredicted RBP11.68□□□□□ -0.54
USP49-203ENST00000394253 TMEM202A6NGA9 273 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 CBLN1P23435 193 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 RLFQ13129 1914 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 CGB1A6NKQ9 187 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 LDLRAD4O15165 306 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 CD3EP07766 207 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 CD1AP06126 327 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 ESDP10768 282 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 PRSS53Q2L4Q9 553 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 PLPP3O14495 311 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 PLCH1Q4KWH8 1693 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 A0A1W2PR80 420 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 HMGA2P52926 109 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 PDCD1Q15116 288 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 AMER3Q8N944 861 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 C8orf44Q96CB5 159 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 RHNO1Q9BSD3 238 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.67□□□□□ -0.54
USP49-203ENST00000394253 IGLV3-10A0A075B6K4 115 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 SSPNQ14714 243 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 VAX1Q5SQQ9 334 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 VWC2LB2RUY7 222 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 TGFAP01135 160 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 HOXB1P14653 301 aaPredicted RBP11.67□□□□□ -0.54
USP49-203ENST00000394253 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 HIST1H2BAQ96A08 127 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 SLC25A10Q9UBX3 287 aaPredicted RBP11.67□□□□□ -0.54
USP49-203ENST00000394253 CTSVO60911 334 aa11.67□□□□□ -0.54
USP49-203ENST00000394253 SSTR5P35346 364 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms