RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TIMM9Q9Y5J7 89 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 YLPM1P49750 1951 aaKnown RBP7.47□□□□□ -1.21
TDP1-202ENST00000393452 PKDREJQ9NTG1 2253 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 TRGV10A0A0A0MS01 117 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 FCGR3BO75015 233 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 OR9G9P0C7N8 305 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 KIR2DS2P43631 304 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 CCL8P80075 99 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 PDLIM3Q53GG5 364 aaPredicted RBP7.47□□□□□ -1.21
TDP1-202ENST00000393452 CT45A1Q5HYN5 189 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 ZNF506Q5JVG8 444 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 OR8G2PQ6IF36 304 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 C1orf229Q6ZS94 237 aaPredicted RBP7.47□□□□□ -1.21
TDP1-202ENST00000393452 ZNF439Q8NDP4 499 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 CLDND2Q8NHS1 167 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 CT45A3Q8NHU0 189 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 ZDHHC16Q969W1 377 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 PINX1Q96BK5 328 aaKnown RBP7.47□□□□□ -1.21
TDP1-202ENST00000393452 SMCO4Q9NRQ5 59 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 DCAF16Q9NXF7 216 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
TDP1-202ENST00000393452 ARFGEF3Q5TH69 2177 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 CEP295Q9C0D2 2601 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 ZNF729A6NN14 1252 aaPredicted RBP7.46□□□□□ -1.21
TDP1-202ENST00000393452 H7C2Y5 167 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 SCAF4O95104 1147 aaKnown RBP7.46□□□□□ -1.21
TDP1-202ENST00000393452 LY86O95711 162 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 GYPAP02724 150 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.21
TDP1-202ENST00000393452 IRF2P14316 349 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 RAB2AP61019 212 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 ICAM4Q14773 271 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 ZNF726P1Q15940 193 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 VWC2Q2TAL6 325 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 AWAT1Q58HT5 328 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 ETV3LQ6ZN32 361 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 FAM216BQ8N7L0 139 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 DEFB108BQ8NET1 73 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 OR52E5Q8NH55 327 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.21
TDP1-202ENST00000393452 CCL13Q99616 98 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 ZNF251Q9BRH9 671 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 TMEM147Q9BVK8 224 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 VSIRQ9H7M9 311 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 PRELID3BQ9Y3B1 194 aa7.46□□□□□ -1.21
TDP1-202ENST00000393452 UBE2L5PA0A1B0GUS4 154 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 C7orf77A4D0Y5 90 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 COLCA2A8K830 154 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 IGHV3-7P01780 117 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 SRP19P09132 144 aaKnown RBP7.46□□□□□ -1.22
TDP1-202ENST00000393452 OR13C7P0DN81 318 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 MDKP21741 143 aaPredicted RBP7.46□□□□□ -1.22
TDP1-202ENST00000393452 GNB2P62879 340 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 RBPJQ06330 500 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 KHDC3LQ587J8 217 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 TMEM41BQ5BJD5 291 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 SOHLH1Q5JUK2 328 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 RND1Q92730 232 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 WFIKKN1Q96NZ8 548 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 S1PR3Q99500 378 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 QTRT1Q9BXR0 403 aaKnown RBP7.46□□□□□ -1.22
TDP1-202ENST00000393452 TUBA4BQ9H853 241 aa7.46□□□□□ -1.22
TDP1-202ENST00000393452 UNKLQ9H9P5 680 aaKnown RBP7.46□□□□□ -1.22
TDP1-202ENST00000393452 NBEAQ8NFP9 2946 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 SAA2-SAA4A0A096LPE2 208 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 C15orf62A8K5M9 175 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 RBMXL2O75526 392 aaKnown RBP7.45□□□□□ -1.22
TDP1-202ENST00000393452 ARG1P05089 322 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 FAM87AP0C7U9 286 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 SAA2P0DJI9 122 aaPredicted RBP7.45□□□□□ -1.22
TDP1-202ENST00000393452 NQO2P16083 231 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 SPCS3P61009 180 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 CTAG1AP78358 180 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 HAGHQ16775 308 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 OR10G4Q8NGN3 311 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 EGLN1Q9GZT9 426 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 IDI2-AS1Q9NZ38 188 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 CEBPZOSA8MTT3 80 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 FOSL1P15407 271 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 RELBQ01201 579 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 FLI1Q01543 452 aaPredicted RBP7.45□□□□□ -1.22
TDP1-202ENST00000393452 PMS2P11Q13670 270 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 RHEBQ15382 184 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 PRAMEF5Q5TYX0 476 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 ADAM5Q6NVV9 412 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 SSX7Q7RTT5 188 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 ZNF429Q86V71 674 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 C15orf54Q8N8G6 183 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 OR4S2Q8NH73 311 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 LEAP2Q969E1 77 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 NGBQ9NPG2 151 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 RPUSD1Q9UJJ7 312 aaKnown RBP7.45□□□□□ -1.22
TDP1-202ENST00000393452 LINC00312Q9Y6C7 94 aa7.45□□□□□ -1.22
TDP1-202ENST00000393452 TNCP24821 2201 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 PIEZO1Q92508 2521 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms