RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 DEFB108BQ8NET1 73 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 OR10A7Q8NGE5 316 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 PLPPR2Q96GM1 343 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 QTRT1Q9BXR0 403 aaKnown RBP11.8□□□□□ -0.52
MKS1-203ENST00000393120 EGLN1Q9GZT9 426 aa11.8□□□□□ -0.52
MKS1-203ENST00000393120 AKAP13Q12802 2813 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 TRAV38-1A0A0B4J264 116 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 hADV38S2A0JD32 116 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 COLCA2A8K830 154 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 SLC31A2O15432 143 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 OR13C7P0DN81 318 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 THBS3P49746 956 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 TMPRSS3P57727 454 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 ERVK-16P61578 105 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 RPP30P78346 268 aaKnown RBP11.79□□□□□ -0.52
MKS1-203ENST00000393120 CCL8P80075 99 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
MKS1-203ENST00000393120 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 C15orf54Q8N8G6 183 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 OR4S2Q8NH73 311 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 ZNF251Q9BRH9 671 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 RPS10P5Q9NQ39 176 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 SH3BGRL2Q9UJC5 107 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 CFAP47Q6ZTR5 3102 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 ASPMQ8IZT6 3477 aa11.79□□□□□ -0.52
MKS1-203ENST00000393120 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 NKX6-3A6NJ46 265 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 UCNP55089 124 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
MKS1-203ENST00000393120 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 HAGHQ16775 308 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 C1orf229Q6ZS94 237 aaPredicted RBP11.78□□□□□ -0.52
MKS1-203ENST00000393120 ZNF429Q86V71 674 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 C1orf87Q8N0U7 546 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
MKS1-203ENST00000393120 AIFM2Q9BRQ8 373 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 RPUSD1Q9UJJ7 312 aaKnown RBP11.78□□□□□ -0.52
MKS1-203ENST00000393120 LINC00312Q9Y6C7 94 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 USF3Q68DE3 2245 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 SAA2-SAA4A0A096LPE2 208 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 C15orf62A8K5M9 175 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 MBP02144 154 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 ARG1P05089 322 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 SAA2P0DJI9 122 aaPredicted RBP11.78□□□□□ -0.52
MKS1-203ENST00000393120 CTRB1P17538 263 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 RELBQ01201 579 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 UTF1Q5T230 341 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 PRAMEF5Q5TYX0 476 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 CTRB2Q6GPI1 263 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 DCAF16Q9NXF7 216 aa11.78□□□□□ -0.52
MKS1-203ENST00000393120 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
MKS1-203ENST00000393120 M0R036 132 aa11.77□□□□□ -0.53
MKS1-203ENST00000393120 TNFRSF13BO14836 293 aaPredicted RBP11.77□□□□□ -0.53
MKS1-203ENST00000393120 SNRNP70P08621 437 aaKnown RBP11.77□□□□□ -0.53
MKS1-203ENST00000393120 FAM87AP0C7U9 286 aa11.77□□□□□ -0.53
MKS1-203ENST00000393120 FOLR2P14207 255 aa11.77□□□□□ -0.53
MKS1-203ENST00000393120 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
MKS1-203ENST00000393120 POU2AF1Q16633 256 aa11.77□□□□□ -0.53
MKS1-203ENST00000393120 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.53
MKS1-203ENST00000393120 ZNF787Q6DD87 383 aa11.77□□□□□ -0.53
MKS1-203ENST00000393120 SLC25A48Q6ZT89 311 aaKnown RBP11.77□□□□□ -0.53
MKS1-203ENST00000393120 SPENQ96T58 3664 aaKnown RBP11.77□□□□□ -0.53
MKS1-203ENST00000393120 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 TMEM178BH3BS89 294 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 IFNA17P01571 189 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 VDAC2P45880 294 aaPredicted RBP11.76□□□□□ -0.53
MKS1-203ENST00000393120 TLE1Q04724 770 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 ETV3LQ6ZN32 361 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 RXFP4Q8TDU9 374 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 CLCC1Q96S66 551 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 GGACTQ9BVM4 153 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 SAP30LQ9HAJ7 183 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 TMEM140Q9NV12 185 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 DSCAMO60469 2012 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 APC2O95996 2303 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 TMPRSS2O15393 492 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 SOX15O60248 233 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 BCL2P10415 239 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 AVPI1Q5T686 147 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 ADAM5Q6NVV9 412 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
MKS1-203ENST00000393120 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 RNASE6Q93091 150 aaKnown RBP11.76□□□□□ -0.53
MKS1-203ENST00000393120 P2RX4Q99571 388 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 SLC25A10Q9UBX3 287 aaPredicted RBP11.76□□□□□ -0.53
MKS1-203ENST00000393120 MLXQ9UH92 298 aa11.76□□□□□ -0.53
MKS1-203ENST00000393120 PPIAL4EA0A075B759 164 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 TRGV8A0A0C4DH27 118 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 PPIAL4DF5H284 164 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 MT-ND4LP03901 98 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 PPIAL4FP0DN26 164 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms