RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MALSU1Q96EH3 234 aa12.34□□□□□ -0.43
MKS1-202ENST00000393119 ZNF462Q96JM2 2506 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 KBTBD11-OT1A0A1B0GTJ5 212 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
MKS1-202ENST00000393119 SSSCA1O60232 199 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 NDUFS6O75380 124 aaKnown RBP12.33□□□□□ -0.44
MKS1-202ENST00000393119 CLN5O75503 358 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 KRASP01116 189 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 S100A6P06703 90 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 G6PCP35575 357 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 NHLH2Q02577 135 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 FABP9Q0Z7S8 132 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 CR1LQ2VPA4 569 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 TCTEX1D2Q8WW35 142 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 CLN8Q9UBY8 286 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 DVL1O14640 695 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 S1PR2O95136 353 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 RPL12P30050 165 aaKnown RBP12.33□□□□□ -0.44
MKS1-202ENST00000393119 HTD2P86397 168 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 TMEM200BQ69YZ2 307 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 SCRT1Q9BWW7 348 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 IFI27L2Q9H2X8 130 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 HRH4Q9H3N8 390 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
MKS1-202ENST00000393119 TRGV10A0A0A0MS01 117 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 FAM24AA6NFZ4 105 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 ZNF729A6NN14 1252 aaPredicted RBP12.32□□□□□ -0.44
MKS1-202ENST00000393119 H3BP45 60 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 CLDN1O95832 211 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 VDAC1P21796 283 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 CDKN1AP38936 164 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 SULT1A2P50226 295 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 ZFHX3Q15911 3703 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 RPL7L1Q6DKI1 246 aaKnown RBP12.32□□□□□ -0.44
MKS1-202ENST00000393119 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 RNASE11Q8TAA1 199 aaKnown RBP12.32□□□□□ -0.44
MKS1-202ENST00000393119 AKR1E2Q96JD6 320 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 OR6C3Q9NZP0 311 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 CACNG5Q9UF02 275 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 NSG2Q9Y328 171 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 RFNGQ9Y644 331 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 TRBV23-1A0A0A0MS06 115 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 F2RL2O00254 374 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 MAS1LP35410 378 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 RPL31P62899 125 aaKnown RBP12.32□□□□□ -0.44
MKS1-202ENST00000393119 WFDC1Q9HC57 220 aa12.32□□□□□ -0.44
MKS1-202ENST00000393119 MYO18BQ8IUG5 2567 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 MAP1AP78559 2803 aaPredicted RBP12.31□□□□□ -0.44
MKS1-202ENST00000393119 NKX2-1P43699 371 aaPredicted RBP12.31□□□□□ -0.44
MKS1-202ENST00000393119 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
MKS1-202ENST00000393119 TMEM33P57088 247 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 DMRT1Q9Y5R6 373 aa12.31□□□□□ -0.44
MKS1-202ENST00000393119 M0R1X1 148 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 WRBO00258 174 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 ST8SIA3O43173 380 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 CHST1O43916 411 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 S100GP29377 79 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 GPR12P47775 334 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 SPINK9Q5DT21 86 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 C1orf87Q8N0U7 546 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 ZNF295-AS1Q8N0V1 137 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 KPTNQ9Y664 436 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 NKX6-3A6NJ46 265 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
MKS1-202ENST00000393119 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 JPT1Q9UK76 154 aa12.3□□□□□ -0.44
MKS1-202ENST00000393119 YPEL1O60688 119 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 IAPPP10997 89 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 SRPXP78539 464 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 YPEL2Q96QA6 119 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 C11orf1Q9H5F2 150 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 UBTD1Q9HAC8 227 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 SAA2-SAA4A0A096LPE2 208 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 FCGR3BO75015 233 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 SAA2P0DJI9 122 aaPredicted RBP12.29□□□□□ -0.44
MKS1-202ENST00000393119 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
MKS1-202ENST00000393119 PAX9P55771 341 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 LYG1Q8N1E2 194 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 YPEL4Q96NS1 127 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 ABHD14AQ9BUJ0 271 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 TMPRSS5Q9H3S3 457 aa12.29□□□□□ -0.44
MKS1-202ENST00000393119 LIN7CQ9NUP9 197 aaKnown RBP12.29□□□□□ -0.44
MKS1-202ENST00000393119 ARHGAP32A7KAX9 2087 aa12.28□□□□□ -0.44
MKS1-202ENST00000393119 MED13LQ71F56 2210 aa12.28□□□□□ -0.44
MKS1-202ENST00000393119 NDUFB3O43676 98 aa12.28□□□□□ -0.44
MKS1-202ENST00000393119 PITX3O75364 302 aa12.28□□□□□ -0.44
MKS1-202ENST00000393119 CST7O76096 145 aa12.28□□□□□ -0.44
MKS1-202ENST00000393119 DANCRP0C864 163 aa12.28□□□□□ -0.44
MKS1-202ENST00000393119 PET100P0DJ07 73 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms