RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 MRPL37Q9BZE1 423 aaKnown RBP12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 F6UZH7 168 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 SPCS3P61009 180 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 NUTF2P61970 127 aaKnown RBP12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR5I1Q13606 314 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 DCAF12Q5T6F0 453 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 MBD3L1Q8WWY6 194 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 IL36GQ9NZH8 169 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR6C3Q9NZP0 311 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 F2Z2F3 143 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 AQP7O14520 342 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 HOXA6P31267 233 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 MSMO1Q15800 293 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 ERASQ7Z444 233 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 ABHD12Q8N2K0 398 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 CMTM2Q8TAZ6 248 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 GNG12Q9UBI6 72 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 LOXL2Q9Y4K0 774 aa12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 YLPM1P49750 1951 aaKnown RBP12.24□□□□□ -0.45
LRRFIP1-204ENST00000392000 PRB4P10163 310 aaPredicted RBP12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 DMXL1Q9Y485 3027 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 AKAP6Q13023 2319 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 B4E171 279 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 TSPAN7P41732 249 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 FXYD3Q14802 87 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 PRAMEF6Q5VXH4 476 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 NPCDR1Q9BY65 106 aa12.23□□□□□ -0.45
LRRFIP1-204ENST00000392000 SCO2A0A1W2PP80 73 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 DUXBA0A1W2PPF3 345 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 FCN1O00602 326 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 PSPNO60542 156 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 ADMP35318 185 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 PRAMEF5Q5TYX0 476 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 DBX2Q6ZNG2 339 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 MDP1Q86V88 176 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 SCCPDHQ8NBX0 429 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR5R1Q8NH85 324 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 FAM122AQ96E09 287 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 TMEM147Q9BVK8 224 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 SH2D2AQ9NP31 389 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 ACACAQ13085 2346 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 NPSP0C0P6 89 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 CNEP1R1Q8N9A8 125 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 GALMQ96C23 342 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 P2RX4Q99571 388 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 POLR3KQ9Y2Y1 108 aaPredicted RBP12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 ABCA4P78363 2273 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 RBFOX2O43251 390 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■■■■ 29.5
LRRFIP1-204ENST00000392000 AGFG2O95081 481 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 HPRT1P00492 218 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 IRF2P14316 349 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 CDKN1AP38936 164 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 GNB1P62873 340 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR1C1Q15619 314 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 NHLRC2Q8NBF2 726 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 TMEM170AQ8WVE7 144 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 NOL4LQ96MY1 436 aaPredicted RBP12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 ZNF391Q9UJN7 358 aa12.22□□□□□ -0.45
LRRFIP1-204ENST00000392000 MGST1P10620 155 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 ACOT6Q3I5F7 207 aaPredicted RBP12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 C2orf88Q9BSF0 95 aa12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 PRDM14Q9GZV8 571 aa12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 GCGP01275 180 aa12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 HTD2P86397 168 aa12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 ABLIM2Q6H8Q1 611 aa12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 MRPL54Q6P161 138 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 OR2M7Q8NG81 312 aa12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 BOKQ9UMX3 212 aaPredicted RBP12.21□□□□□ -0.45
LRRFIP1-204ENST00000392000 TRAV1-1A0A0B4J248 108 aa12.21□□□□□ -0.46
LRRFIP1-204ENST00000392000 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.46
LRRFIP1-204ENST00000392000 C6orf15Q6UXA7 325 aaPredicted RBP12.21□□□□□ -0.46
LRRFIP1-204ENST00000392000 Q6ZVH6 145 aa12.21□□□□□ -0.46
LRRFIP1-204ENST00000392000 PSMG3Q9BT73 122 aaPredicted RBP12.21□□□□□ -0.46
LRRFIP1-204ENST00000392000 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.46
LRRFIP1-204ENST00000392000 HBZP02008 142 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 CRISP2P16562 243 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 ERVFC1-1P60608 527 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 TP53TG5Q9Y2B4 290 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 ADGRG4Q8IZF6 3080 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 SH2D1BO14796 132 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 SERF1AO75920 110 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 WISP2O76076 250 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 GATA2P23769 480 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 GFRA1P56159 465 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 CATR1Q13166 79 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 TMEM251Q8N6I4 163 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 RIMS4Q9H426 269 aaPredicted RBP12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 FOXJ2Q9P0K8 574 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 DUSP13Q9UII6 198 aa12.2□□□□□ -0.46
LRRFIP1-204ENST00000392000 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms