RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ROM1Q03395 351 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HCP5Q6MZN7 132 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 LCN2P80188 198 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 MEF2CQ06413 473 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-204ENST00000391814 TFF3Q07654 80 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 TMEM170AQ8WVE7 144 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 ZNF714Q96N38 554 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 RASL10BQ96S79 203 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 VKORC1L1Q8N0U8 176 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 RNF7Q9UBF6 113 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 KLF4O43474 513 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BKO60814 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BJP06899 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BOP23527 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BBP33778 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BDP58876 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BCP62807 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST2H2BEQ16778 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-204ENST00000391814 Q6ZS52 159 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 ZNF721Q8TF20 911 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BHQ93079 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BNQ99877 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BMQ99879 126 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 SPAG8Q99932 426 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-204ENST00000391814 PHF7Q9BWX1 381 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-204ENST00000391814 G6PC2Q9NQR9 355 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-204ENST00000391814 MAGEA5P43359 124 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 ZP4Q12836 540 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 GAB4Q2WGN9 574 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 STPG3Q8N7X2 389 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 ZNF441Q8N8Z8 693 aa13.89□□□□□ -0.19
SHANK1-204ENST00000391814 LAMB2P55268 1798 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 COL9A1P20849 921 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 DOCK1Q14185 1865 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 MDP1Q86V88 176 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 NUDT11Q96G61 164 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 RCC1LQ96I51 464 aaKnown RBP13.88□□□□□ -0.19
SHANK1-204ENST00000391814 NINQ8N4C6 2090 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 RRHO14718 337 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 MMDQ15546 238 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 TUBA4BQ9H853 241 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 IGHV1OR21-1A0A087WYE8 117 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 ICAM4Q14773 271 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 NRN1Q9NPD7 142 aa13.88□□□□□ -0.19
SHANK1-204ENST00000391814 ATP5G3P48201 142 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 CX3CL1P78423 397 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 PRDM14Q9GZV8 571 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 DOCK5Q9H7D0 1870 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 C8orf88P0DMB2 117 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 PRDX2P32119 198 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 PSG4Q00888 419 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 MYO16Q9Y6X6 1858 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 PPIAL4DF5H284 164 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 TMEM78Q5T7P6 136 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 CCL3P10147 92 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 BEND2Q8NDZ0 799 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 MRAP2Q96G30 205 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 C9orf172C9J069 976 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 K7N7A8 449 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 NDUFA3O95167 84 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 REG1AP05451 166 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 SCNM1Q9BWG6 230 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 CHRNA10Q9GZZ6 450 aa13.87□□□□□ -0.19
SHANK1-204ENST00000391814 SMAGPQ0VAQ4 97 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 NPCDR1Q9BY65 106 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 HOXC4P09017 264 aaPredicted RBP13.86□□□□□ -0.19
SHANK1-204ENST00000391814 ABHD12Q8N2K0 398 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 DRD3P35462 400 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 RTBDNQ9BSG5 229 aaPredicted RBP13.86□□□□□ -0.19
SHANK1-204ENST00000391814 TRAV8-2A0A0B4J237 113 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 PGPEP1LA6NFU8 196 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 C2CD4DB7Z1M9 353 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 CA11O75493 328 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 DXOO77932 396 aaKnown RBP13.86□□□□□ -0.19
SHANK1-204ENST00000391814 C16orf92Q96LL3 132 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 SSBP4Q9BWG4 385 aaPredicted RBP13.86□□□□□ -0.19
SHANK1-204ENST00000391814 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 IGLV1-36A0A0B4J1U3 117 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 SLC25A28Q96A46 364 aa13.86□□□□□ -0.19
SHANK1-204ENST00000391814 MARS2Q96GW9 593 aaKnown RBP13.86□□□□□ -0.19
SHANK1-204ENST00000391814 PSMG3Q9BT73 122 aaPredicted RBP13.85□□□□□ -0.19
SHANK1-204ENST00000391814 HIST3H2BBQ8N257 126 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 HIST1H2BLQ99880 126 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 SSPNQ14714 243 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 ASPHD2Q6ICH7 369 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 TMEM108Q6UXF1 575 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
SHANK1-204ENST00000391814 PAPPAQ13219 1627 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 FAM90A26D6RGX4 464 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 CACNG7P62955 275 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 TCF24Q7RTU0 167 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 TEX29Q8N6K0 151 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 FSCN3Q9NQT6 498 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 TCFL5Q9UL49 500 aa13.85□□□□□ -0.19
SHANK1-204ENST00000391814 IGHV3-72A0A0B4J1Y9 119 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms