RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 SPSB3Q6PJ21 355 aa10.16□□□□□ -0.78
CAPRIN1-202ENST00000389645 ZDHHC16Q969W1 377 aa10.16□□□□□ -0.78
CAPRIN1-202ENST00000389645 SARAFQ96BY9 339 aa10.16□□□□□ -0.78
CAPRIN1-202ENST00000389645 TVP23CQ96ET8 276 aa10.16□□□□□ -0.78
CAPRIN1-202ENST00000389645 PKIBQ9C010 78 aa10.16□□□□□ -0.78
CAPRIN1-202ENST00000389645 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 AQP7O14520 342 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 S1PR2O95136 353 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 IFNA10P01566 189 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 IGKV1-39P01597 117 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 TRGC2P03986 189 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 IGKV1D-39P04432 117 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 MMP9P14780 707 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 MSMO1Q15800 293 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 SPACA3Q8IXA5 215 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 LRRC29Q8WV35 223 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 PACRGQ96M98 296 aaPredicted RBP10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 MAP1LC3BQ9GZQ8 125 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 METRNQ9UJH8 293 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 TGIF2-C20orf24A0A0A6YYL0 155 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 NKX6-1P78426 367 aaPredicted RBP10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 Q6P435 159 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 Q8IYB0 196 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 Q8NFD4 153 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 SNX22Q96L94 193 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 DKK4Q9UBT3 224 aa10.15□□□□□ -0.78
CAPRIN1-202ENST00000389645 LOC102724200A0A096LPH7 203 aaPredicted RBP10.15□□□□□ -0.79
CAPRIN1-202ENST00000389645 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.79
CAPRIN1-202ENST00000389645 TFPI2P48307 235 aa10.15□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF880Q6PDB4 577 aa10.15□□□□□ -0.79
CAPRIN1-202ENST00000389645 AURKAIP1Q9NWT8 199 aaPredicted RBP10.15□□□□□ -0.79
CAPRIN1-202ENST00000389645 PIEZO1Q92508 2521 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 RNF212BA8MTL3 300 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 SPRY3O43610 288 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 FCGR3BO75015 233 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 SS18L1O75177 396 aaPredicted RBP10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 COL10A1Q03692 680 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 Q6ZS92 163 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 MOB1BQ7L9L4 216 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 VKORC1L1Q8N0U8 176 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 LEAP2Q969E1 77 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 TNCP24821 2201 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 A0A0U1RQK1 487 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 DUXBA0A1W2PPF3 345 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 C17orf98A8MV24 154 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZG16O60844 167 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 FGF7P21781 194 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 MDH2P40926 338 aaKnown RBP10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 UBE2G2P60604 165 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 RPL30P62888 115 aaKnown RBP10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 ICAM4Q14773 271 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF718Q3SXZ3 478 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 ACSF3Q4G176 576 aaPredicted RBP10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 IGFL3Q6UXB1 125 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 LINC00596Q86U02 117 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 SMIM7Q9BQ49 75 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 RNF115Q9Y4L5 304 aa10.14□□□□□ -0.79
CAPRIN1-202ENST00000389645 CBY3A6NI87 242 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 M0R1B8 84 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 FAM201AQ5SY85 155 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 CST9LP1Q5W188 147 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF497Q6ZNH5 498 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF610Q8N9Z0 462 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 OR10P1Q8NGE3 313 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 EGLN1Q9GZT9 426 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 RBKSQ9H477 322 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 WNK2Q9Y3S1 2297 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 A8MWP6 167 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 PGA5P0DJD9 388 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 RAB4BP61018 213 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF585BQ52M93 769 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 OR4F5Q8NH21 305 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 OR4F4Q96R69 305 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 COL6A6A6NMZ7 2263 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BKO60814 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 PTBP3O95758 552 aaKnown RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BJP06899 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BOP23527 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BBP33778 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BDP58876 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BCP62807 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST2H2BEQ16778 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 ARSJQ5FYB0 599 aaPredicted RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF705AQ6ZN79 300 aaPredicted RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 CLDND2Q8NHS1 167 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BHQ93079 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BNQ99877 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HIST1H2BMQ99879 126 aa10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 HEYLQ9NQ87 328 aaPredicted RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 YLPM1P49750 1951 aaKnown RBP10.13□□□□□ -0.79
CAPRIN1-202ENST00000389645 SPINT2O43291 252 aa10.12□□□□□ -0.79
CAPRIN1-202ENST00000389645 ZNF737O75373 536 aa10.12□□□□□ -0.79
CAPRIN1-202ENST00000389645 IFNA1P01562 189 aa10.12□□□□□ -0.79
CAPRIN1-202ENST00000389645 CXCL1P09341 107 aa10.12□□□□□ -0.79
CAPRIN1-202ENST00000389645 CECR9P0C854 216 aa10.12□□□□□ -0.79
CAPRIN1-202ENST00000389645 GPR12P47775 334 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms