RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 OR5AU1Q8NGC0 362 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 FGFBP3Q8TAT2 258 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 DEFB104AQ8WTQ1 72 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 SCARF2Q96GP6 870 aaPredicted RBP4.27□□□□□ -1.73
LTN1-202ENST00000389194 Q96M66 194 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 ANGPTL4Q9BY76 406 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 PCED1AQ9H1Q7 454 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 KLK15Q9H2R5 256 aa4.27□□□□□ -1.73
LTN1-202ENST00000389194 A0A1B0GU03 582 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 PGPEP1LA6NFU8 196 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TMEM127O75204 238 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 PITX3O75364 302 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 FSTP19883 344 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 ZNF345Q14585 488 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 FREM1Q5H8C1 2179 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 LILRB1Q8NHL6 650 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 RPRMQ9NS64 109 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 PIEZO2Q9H5I5 2752 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 LNP1A1A4G5 178 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 ZNF207O43670 478 aaKnown RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 IGKV3-20P01619 116 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 COMPP49747 757 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 HOXA4Q00056 320 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 FAM27E3Q08E93 113 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 GABRA6Q16445 453 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 ST6GALNAC6Q969X2 333 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 PGLYRP4Q96LB8 373 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 QTRT1Q9BXR0 403 aaKnown RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 RABAC1Q9UI14 185 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 PILRBQ9UKJ0 227 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 A0A1W2PR77 199 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 ISG15P05161 165 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 FTH1P19P0C7X4 201 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 LINC00869P0C866 280 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 GZMHP20718 246 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 CBLN1P23435 193 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 NMUP48645 174 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 FOXA3P55318 350 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 LINC00205P59089 165 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 SPCS3P61009 180 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TFF3Q07654 80 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TEX30Q5JUR7 227 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 FAM214BQ7L5A3 538 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 WDFY1Q8IWB7 410 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TAF15Q92804 592 aaKnown RBP eCLIP4.26□□□□□ -1.73
LTN1-202ENST00000389194 CHCHD2Q9Y6H1 151 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 MYO18BQ8IUG5 2567 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 ZSWIM8A7E2V4 1837 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 CTXND1A0A1B0GTU2 59 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TMEM14DPA8MWL7 114 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 H7C2G1 150 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 WISP1O95388 367 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 MPV17P39210 176 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 LHX2P50458 406 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 DRAM1Q8N682 238 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 LINC01560Q8TB33 94 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 RAB37Q96AX2 223 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TMEM208Q9BTX3 173 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 WDR61Q9GZS3 305 aaKnown RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 ALX4Q9H161 411 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 RALGAPA2Q2PPJ7 1873 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 SCN4AP35499 1836 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 IGKV3D-11A0A0A0MRZ8 115 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 MARCH11A6NNE9 402 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 DNASE2O00115 360 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 CDX4O14627 284 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 TRGC1P0CF51 173 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 MST1P26927 711 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 NUBP1P53384 320 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 PRRX1P54821 245 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 TMEM187Q14656 261 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 KLHDC1Q8N7A1 406 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 RTBDNQ9BSG5 229 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 A0A0G2JMZ2 1700 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 LRRC37A2A6NM11 1700 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 RNF222A6NCQ9 220 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 CEACAM18A8MTB9 384 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 DIRC3C9JPN6 131 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 C16orf97H3BN30 126 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 ACP1P24666 158 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 MEF2BQ02080 365 aaPredicted RBP4.26□□□□□ -1.73
LTN1-202ENST00000389194 IER2Q9BTL4 223 aa4.26□□□□□ -1.73
LTN1-202ENST00000389194 APCSP02743 223 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 RND2P52198 227 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 CFHR1Q03591 330 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 LY6EQ16553 131 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 TMEM105Q8N8V8 129 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 PAXXQ9BUH6 204 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 WDR54Q9H977 334 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 LOC285556D6RIA3 1793 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 IGKV1D-13A0A0B4J2D9 117 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 IGKV1-9A0A0C4DH69 117 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 A0A1B0GV90 55 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 PGPA6NDG6 321 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 IGKV1-13P0DP09 117 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 CCKARP32238 428 aa4.25□□□□□ -1.73
LTN1-202ENST00000389194 POC1AQ8NBT0 407 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms