RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SOX15O60248 233 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 LYZL6O75951 148 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 IGKV1D-33P01593 117 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 IGKV1-33P01594 117 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 GPM6AP51674 278 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 RPL15P61313 204 aaKnown RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 PPP1CBP62140 327 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 MRPL49Q13405 166 aaKnown RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 TMEM249Q2WGJ8 235 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 VWA1Q6PCB0 445 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 INO80CQ6PI98 192 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 TMEM144Q7Z5S9 345 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF573Q86YE8 665 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 C1orf162Q8NEQ5 155 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 OR5A2Q8NGI9 324 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 OR10G9Q8NGN4 311 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 OR10G7Q8NGN6 311 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 TMEM147Q9BVK8 224 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 CBLN4Q9NTU7 201 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 DKK4Q9UBT3 224 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 PXMP4Q9Y6I8 212 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 RANP62826 216 aaKnown RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 TESK1Q15569 626 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 FAM180AQ6UWF9 173 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 RBMXL3Q8N7X1 1067 aaKnown RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 ATG101Q9BSB4 218 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 PLSCR4Q9NRQ2 329 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 CRIM1Q9NZV1 1036 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 POLR3KQ9Y2Y1 108 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 TRAPPC1Q9Y5R8 145 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 MPC1Q9Y5U8 109 aa7.5□□□□□ -1.21
GPNMB-202ENST00000381990 INTS1Q8N201 2190 aaKnown RBP7.5□□□□□ -1.21
GPNMB-202ENST00000381990 ANKRD30BLA7E2S9 258 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 HSPB6O14558 160 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 LINC00614P0C842 121 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 IL3RAP26951 378 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 PAFAH1B2P68402 229 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 FOXF2Q12947 444 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 FOXC1Q12948 553 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 ACSM6Q6P461 480 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 BATF2Q8N1L9 274 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 ZCCHC14Q8WYQ9 949 aaKnown RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MS4A10Q96PG2 267 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 C20orf144Q9BQM9 153 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 TXNDC17Q9BRA2 123 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 FGF23Q9GZV9 251 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 SLC25A22Q9H936 323 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 HSPB7Q9UBY9 170 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 APC2O95996 2303 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MBD3L4A6NDZ8 208 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MBD3L3A6NE82 208 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MBD3L5A6NJ08 208 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 OR5B21A6NL26 309 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MARCH11A6NNE9 402 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 CELA3BP08861 270 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 OR3A1P47881 315 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MSMO1Q15800 293 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 IZUMO4Q1ZYL8 232 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF585BQ52M93 769 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 C20orf204Q6ZNR8 217 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 ZNF709Q8N972 641 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 MBD3L2Q8NHZ7 208 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-202ENST00000381990 OR51B6Q9H340 312 aa7.49□□□□□ -1.21
GPNMB-202ENST00000381990 A0A1W2PR80 420 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 C11orf94C9JXX5 98 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 C17orf112F2Z3M2 114 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 K7EM74 188 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 DLEU1O43261 78 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 SMPD2O60906 423 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 TNFSF13O75888 250 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 CLDN1O95832 211 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 SPINK2P20155 84 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 G0S2P27469 103 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 HOXC12P31275 282 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 MYPOPQ86VE0 399 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-202ENST00000381990 OR5P3Q8WZ94 311 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 CIB3Q96Q77 187 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-202ENST00000381990 DIRC2Q96SL1 478 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 GOLT1BQ9Y3E0 138 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 ACACAQ13085 2346 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 CHD3Q12873 2000 aaKnown RBP7.48□□□□□ -1.21
GPNMB-202ENST00000381990 FRYQ5TBA9 3013 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 TRAV9-1A0A075B6T8 112 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 TRAV24A0A0B4J272 114 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 F6UZH7 168 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 HPRT1P00492 218 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 YPEL3P61236 119 aaPredicted RBP7.48□□□□□ -1.21
GPNMB-202ENST00000381990 VWC2Q2TAL6 325 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 FFAR4Q5NUL3 377 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 FAM78BQ5VT40 261 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 OR8G2PQ6IF36 304 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 FGFRL1Q8N441 504 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 WDR31Q8NA23 367 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 OR10P1Q8NGE3 313 aa7.48□□□□□ -1.21
GPNMB-202ENST00000381990 RAB1CQ92928 201 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms