RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 GALNT14Q96FL9 552 aa14.63□□□□□ -0.07
SGCB-201ENST00000381431 AMMECR1Q9Y4X0 333 aaPredicted RBP14.63□□□□□ -0.07
SGCB-201ENST00000381431 EFNA2O43921 213 aa14.63□□□□□ -0.07
SGCB-201ENST00000381431 FDCSPQ8NFU4 85 aa14.63□□□□□ -0.07
SGCB-201ENST00000381431 VN1R17PQ8TDU5 208 aa14.63□□□□□ -0.07
SGCB-201ENST00000381431 ZNF703Q9H7S9 590 aaPredicted RBP14.63□□□□□ -0.07
SGCB-201ENST00000381431 LPAR2Q9HBW0 351 aa14.63□□□□□ -0.07
SGCB-201ENST00000381431 ZNF646O15015 1829 aaPredicted RBP14.62□□□□□ -0.07
SGCB-201ENST00000381431 CCKARP32238 428 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 OR5P3Q8WZ94 311 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 TMEM140Q9NV12 185 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 NAGKQ9UJ70 344 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 KCNMB1Q16558 191 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 Q6ZN92 141 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 RNF126Q9BV68 326 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 SPG11Q96JI7 2443 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 LINC00869P0C866 280 aa14.62□□□□□ -0.07
SGCB-201ENST00000381431 YTHDF2Q9Y5A9 579 aaKnown RBP14.62□□□□□ -0.07
SGCB-201ENST00000381431 FADS6Q8N9I5 356 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 COA4Q9NYJ1 87 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 ACAA1P09110 424 aaPredicted RBP14.61□□□□□ -0.07
SGCB-201ENST00000381431 OR8B3Q8NGG8 313 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 OR8B2Q96RD0 313 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 NAT2P11245 290 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 HEATR5AQ86XA9 2040 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 IGKV1D-8A0A087WSZ0 117 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 ZNF735P0CB33 412 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 SP9P0CG40 484 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 C5orf17Q8NAS9 161 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 ZDHHC16Q969W1 377 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 STARD4Q96DR4 205 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 ZNF714Q96N38 554 aa14.61□□□□□ -0.07
SGCB-201ENST00000381431 M0R143 59 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 FAM87AP0C7U9 286 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 PAXXQ9BUH6 204 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 REPIN1Q9BWE0 567 aaKnown RBP14.6□□□□□ -0.07
SGCB-201ENST00000381431 CEACAM18A8MTB9 384 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 J3KRW8 73 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 ACP1P24666 158 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 C1orf185Q5T7R7 199 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 PRR7Q8TB68 274 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 PERPQ96FX8 193 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 TCF19Q9Y242 345 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 WDR81Q562E7 1941 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 LINC00271P0C7V0 271 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 WFIKKN1Q96NZ8 548 aa14.6□□□□□ -0.07
SGCB-201ENST00000381431 C12orf77C9JDV5 145 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 TCAPO15273 167 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 LINC00518Q8N0U6 118 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 RCC1LQ96I51 464 aaKnown RBP14.59□□□□□ -0.07
SGCB-201ENST00000381431 DCTN5Q9BTE1 182 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 HILPDAQ9Y5L2 63 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 SLC25A17O43808 307 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 MPDU1O75352 247 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 RPL27AP46776 148 aaKnown RBP14.59□□□□□ -0.07
SGCB-201ENST00000381431 FAM201AQ5SY85 155 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 ZNF441Q8N8Z8 693 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 FGF11Q92914 225 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 LYZL4Q96KX0 146 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 SGK494Q96LW2 274 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 TBX15Q96SF7 602 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 UCP1P25874 307 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 HSPE1P61604 102 aaKnown RBP14.59□□□□□ -0.07
SGCB-201ENST00000381431 RSPO3Q9BXY4 272 aaPredicted RBP14.59□□□□□ -0.07
SGCB-201ENST00000381431 PARLQ9H300 379 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 FAM90A26D6RGX4 464 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 CCL21O00585 134 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 PTGDSP41222 190 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 RPL8P62917 257 aaKnown RBP14.59□□□□□ -0.07
SGCB-201ENST00000381431 ELOBQ15370 118 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 VWA1Q6PCB0 445 aa14.59□□□□□ -0.07
SGCB-201ENST00000381431 ZFHX2Q9C0A1 2572 aaPredicted RBP14.59□□□□□ -0.07
SGCB-201ENST00000381431 SMIM17P0DL12 118 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 SLC25A53Q5H9E4 307 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 LINC00470Q9BZP3 86 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 HEXA-AS1Q9H8Q6 139 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 GOSR1O95249 250 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 ORM1P02763 201 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 RND2P52198 227 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 STXBP6Q8NFX7 210 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 LSM10Q969L4 123 aaKnown RBP14.58□□□□□ -0.08
SGCB-201ENST00000381431 RNF24Q9Y225 148 aa14.58□□□□□ -0.08
SGCB-201ENST00000381431 A0A0A6YYD4 124 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 CDX4O14627 284 aaPredicted RBP14.57□□□□□ -0.08
SGCB-201ENST00000381431 HIST1H1BP16401 226 aaKnown RBP14.57□□□□□ -0.08
SGCB-201ENST00000381431 COX19Q49B96 90 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 Q8WTZ3 238 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 UFC1Q9Y3C8 167 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 GOLT1BQ9Y3E0 138 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 IGKV1D-13A0A0B4J2D9 117 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 IGKV1-13P0DP09 117 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 Q6ZT83 130 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 BIVMQ86UB2 503 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 SMIM8Q96KF7 97 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 SMPD2O60906 423 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 ARL14EPLP0DKL9 152 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 LGALS7P47929 136 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 SRSF3P84103 164 aaKnown RBP14.57□□□□□ -0.08
SGCB-201ENST00000381431 PSG7Q13046 419 aa14.57□□□□□ -0.08
SGCB-201ENST00000381431 KIAA1644Q3SXP7 199 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms