RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 BTNL8Q6UX41 500 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 DOLPP1Q86YN1 238 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 C15orf54Q8N8G6 183 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 PRNDQ9UKY0 176 aa12□□□□□ -0.49
SHROOM1-203ENST00000378679 ATRXP46100 2492 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 A0A1W2PN81 502 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 MPTX1A8MV57 137 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 E9PLN8 166 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 J3QR06 171 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 CHRNA7P36544 502 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 NBL1P41271 181 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 TCF15Q12870 199 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 WDFY1Q8IWB7 410 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 MRPL37Q9BZE1 423 aaKnown RBP11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 PTPRSQ13332 1948 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 SRSF10O75494 262 aaKnown RBP11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 MMP9P14780 707 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 BPIFB3P59826 476 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 B2MP61769 119 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 SELENOHQ8IZQ5 122 aaKnown RBP11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 OR10G4Q8NGN3 311 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 OR10G9Q8NGN4 311 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 OR10G7Q8NGN6 311 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 RTBDNQ9BSG5 229 aaPredicted RBP11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 APELAP0DMC3 54 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 RUNX1Q01196 453 aa11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 AURKAIP1Q9NWT8 199 aaPredicted RBP11.99□□□□□ -0.49
SHROOM1-203ENST00000378679 LAMA1P25391 3075 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 F8VVB4 439 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 F8VWA3 439 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 TFF1P04155 84 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 NPY1RP25929 384 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 BAGE3Q86Y29 109 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 BAGE2Q86Y30 109 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 OR13A1Q8NGR1 328 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 PLPPR1Q8TBJ4 325 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 VKORC1Q9BQB6 163 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 JPT1Q9UK76 154 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 C17orf100A8MU93 164 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 RBP4P02753 201 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 ZNF880Q6PDB4 577 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 SSMEM1Q8WWF3 244 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 LILRA1O75019 489 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 ZNF735P0CB33 412 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 OR13D1Q8NGV5 346 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 BORCS7Q96B45 105 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 WFIKKN1Q96NZ8 548 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 SEBOXQ9HB31 216 aaPredicted RBP11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 IDI2-AS1Q9NZ38 188 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 MSRB2Q9Y3D2 182 aa11.98□□□□□ -0.49
SHROOM1-203ENST00000378679 TRAV24A0A0B4J272 114 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 DVL1O14640 695 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 ACSM6Q6P461 480 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 MRPL30Q8TCC3 161 aaKnown RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 GALNT14Q96FL9 552 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 FAM210BQ96KR6 192 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 ACAA1P09110 424 aaPredicted RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 ARF6P62330 175 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 MMDQ15546 238 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 ZNF343Q6P1L6 599 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 TCTEX1D1Q8N7M0 179 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 MBD3L4A6NDZ8 208 aaPredicted RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 MBD3L3A6NE82 208 aaPredicted RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 MBD3L5A6NJ08 208 aaPredicted RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 SEC11BP0C7V7 166 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 UBE2G1P62253 170 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 TIGITQ495A1 244 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 OR10A7Q8NGE5 316 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 MBD3L2Q8NHZ7 208 aaPredicted RBP11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 DOK5Q9P104 306 aa11.97□□□□□ -0.49
SHROOM1-203ENST00000378679 A0A1W2PNU3 283 aaPredicted RBP11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 H0Y8G0 127 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 S1PR2O95136 353 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 BRS3P32247 399 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 SSTP61278 116 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 RTN4RL2Q86UN3 420 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 ZNF596Q8TC21 504 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 HIST1H2BAQ96A08 127 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 TXN2Q99757 166 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 HILPDAQ9Y5L2 63 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 MALRD1Q5VYJ5 2156 aa11.96□□□□□ -0.49
SHROOM1-203ENST00000378679 MARCH11A6NNE9 402 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms