RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 COX6A1P12074 109 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 ZP3P21754 424 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 B9A039 149 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 NPIPB11E5RHQ5 1161 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 M0R143 59 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 DSPPQ9NZW4 1301 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 LAMB2P55268 1798 aa12.12□□□□□ -0.47
TRIM13-202ENST00000378182 M0R381 172 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 CD1AP06126 327 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 TPRP12270 2363 aaKnown RBP12.11□□□□□ -0.47
TRIM13-202ENST00000378182 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.11□□□□□ -0.47
TRIM13-202ENST00000378182 LMX1BO60663 402 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 SAA1P0DJI8 122 aaPredicted RBP12.11□□□□□ -0.47
TRIM13-202ENST00000378182 TMEM177Q53S58 311 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 MIC13Q5XKP0 118 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
TRIM13-202ENST00000378182 SIGLEC12Q96PQ1 595 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 ANGPTL4Q9BY76 406 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 CXorf51AA0A1B0GTR3 108 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 NDUFB4O95168 129 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 FGF12P61328 243 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 IBA57Q5T440 356 aaKnown RBP12.11□□□□□ -0.47
TRIM13-202ENST00000378182 MMD2Q8IY49 270 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
TRIM13-202ENST00000378182 DNAL4O96015 105 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 C10orf111Q8N326 155 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 ST6GAL2Q96JF0 529 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 TMEM238LA0A1B0GVL6 79 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 A6NJY4 79 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 IL4P05112 153 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 RUNX1Q01196 453 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
TRIM13-202ENST00000378182 CTSBP07858 339 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
TRIM13-202ENST00000378182 SRSF7Q16629 238 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM13-202ENST00000378182 FOXB2Q5VYV0 432 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 SCMH1Q96GD3 660 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 CHRNA10Q9GZZ6 450 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 GLIPR1P48060 266 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
TRIM13-202ENST00000378182 TP53BP1Q12888 1972 aaPredicted RBP12.1□□□□□ -0.47
TRIM13-202ENST00000378182 FGF5P12034 268 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 RAB33BQ9H082 229 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 ELOVL5Q9NYP7 299 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 ODAMA1E959 279 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 NDUFA2O43678 99 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 FAM131CQ96AQ9 280 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 GPR183P32249 361 aa12.1□□□□□ -0.47
TRIM13-202ENST00000378182 MARS2Q96GW9 593 aaKnown RBP12.1□□□□□ -0.47
TRIM13-202ENST00000378182 TIAF1O95411 115 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 ARL14EPLP0DKL9 152 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 CD24P25063 80 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 PPP1R32Q7Z5V6 425 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 C2orf88Q9BSF0 95 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 FOXA2Q9Y261 457 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-202ENST00000378182 VSIG8P0DPA2 414 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 GOLT1AQ6ZVE7 132 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 IFNL4K9M1U5 179 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-202ENST00000378182 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-202ENST00000378182 PSCAO43653 123 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 TMEM127O75204 238 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 ZNF646O15015 1829 aaPredicted RBP12.09□□□□□ -0.47
TRIM13-202ENST00000378182 PITX3O75364 302 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 CSRP2Q16527 193 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 LDLRAD2Q5SZI1 272 aa12.09□□□□□ -0.47
TRIM13-202ENST00000378182 ACAA1P09110 424 aaPredicted RBP12.08□□□□□ -0.47
TRIM13-202ENST00000378182 XAF1Q6GPH4 301 aa12.08□□□□□ -0.47
TRIM13-202ENST00000378182 WNT10AQ9GZT5 417 aa12.08□□□□□ -0.47
TRIM13-202ENST00000378182 PI4KAP42356 2102 aa12.08□□□□□ -0.47
TRIM13-202ENST00000378182 H3BQ15 152 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 CELA3AP09093 270 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 CFAP161Q6P656 301 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
TRIM13-202ENST00000378182 HS3ST3B1Q9Y662 390 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 A0A1W2PP11 408 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 OGG1O15527 345 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 TAF1LQ8IZX4 1826 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 TMEM160Q9NX00 188 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
TRIM13-202ENST00000378182 DMKNQ6E0U4 476 aaPredicted RBP12.08□□□□□ -0.48
TRIM13-202ENST00000378182 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 A8MWL6 223 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.48
TRIM13-202ENST00000378182 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
TRIM13-202ENST00000378182 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
TRIM13-202ENST00000378182 RPL39P5Q59GN2 51 aa12.07□□□□□ -0.48
TRIM13-202ENST00000378182 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms