RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PGLYRP4Q96LB8 373 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 OR2V2Q96R30 315 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 C1RLQ9NZP8 487 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 IGLV1-36A0A0B4J1U3 117 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 PQLC2Q6ZP29 291 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 ATOH7Q8N100 152 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 NPVFQ9HCQ7 196 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 METTL1Q9UBP6 276 aaKnown RBP10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 PILRAQ9UKJ1 303 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 DHRS7CA6NNS2 312 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 DANCRP0C864 163 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 DLX1P56177 255 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 NUP214P35658 2090 aaPredicted RBP10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 A0A0J9YW62 118 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 ERGP11308 486 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 FABP2P12104 132 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 MEF2BQ02080 365 aaPredicted RBP10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 ZNF600Q6ZNG1 722 aa10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 NPDC1Q9NQX5 325 aaPredicted RBP10.31□□□□□ -0.76
PCDHA9-201ENST00000378122 IGHV1-45A0A0A0MS14 117 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 CEACAM18A8MTB9 384 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 KLF7O75840 302 aaPredicted RBP10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 BTF3P20290 206 aaKnown RBP10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 PCP4P48539 62 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 FBXW9Q5XUX1 488 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 LEMD1Q68G75 181 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 KCNE5Q9UJ90 142 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 GRIFINA4D1Z8 144 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 M0R3E3 92 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 MMDQ15546 238 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 ESPL1Q14674 2120 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 A0A1W2PQF6 199 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 MIC13Q5XKP0 118 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 INO80CQ6PI98 192 aaPredicted RBP10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 SLC25A47Q6Q0C1 308 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 G6PC2Q9NQR9 355 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 GSN-AS1Q9NRJ2 163 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 IGHV4-34P06331 123 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 CTSSP25774 331 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 TAF15Q92804 592 aaKnown RBP eCLIP10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 ZDHHC8Q9ULC8 765 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 ARID2Q68CP9 1835 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 ZNF236Q9UL36 1845 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 OR10S1Q8NGN2 331 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 GMPPAQ96IJ6 420 aaPredicted RBP10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 FAM27BQ5VT28 67 aa10.3□□□□□ -0.76
PCDHA9-201ENST00000378122 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 PPIAL4EA0A075B759 164 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 PPIAL4DF5H284 164 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 KBTBD11O94819 623 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 PPIAL4FP0DN26 164 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 PARLQ9H300 379 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 PPIAL4AQ9Y536 164 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 NPIPB9F8W1W9 429 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 ARF6P62330 175 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 CDCP2Q5VXM1 449 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 LHFPL6Q9Y693 200 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 AGAP20933 346 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 KIR2DL2P43627 348 aaPredicted RBP10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 FER1L5A0AVI2 2057 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 POC1AQ8NBT0 407 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 CCL13Q99616 98 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 OR2A4O95047 310 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 CTSBP07858 339 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 TM4SF20Q53R12 229 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 OR1N2Q8NGR9 330 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 OR2A7Q96R45 310 aa10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 F11RQ9Y624 299 aaKnown RBP10.29□□□□□ -0.76
PCDHA9-201ENST00000378122 REG1AP05451 166 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 TMEM187Q14656 261 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 CDC42EP3Q9UKI2 254 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 HYPMO75409 117 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 CA11O75493 328 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 IGHV3-48P01763 117 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 MT-ND6P03923 174 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 C3orf36Q3SXR2 165 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 OR8G5Q8NG78 346 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 LEAP2Q969E1 77 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 K7N7A8 449 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 SRIP30626 198 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 EFNB1P98172 346 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 C1orf100Q5SVJ3 147 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 LAMTOR1Q6IAA8 161 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 ZNF818PQ6ZRF7 136 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 ITLN2Q8WWU7 325 aaPredicted RBP10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 J3QKU1 62 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 ZNF826PQ6ZT77 177 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 APCDD1LQ8NCL9 501 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 ZNF501Q96CX3 271 aaPredicted RBP10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 WDR54Q9H977 334 aa10.28□□□□□ -0.76
PCDHA9-201ENST00000378122 UCP2P55851 309 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms