RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LINC00869P0C866 280 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 KRTDAPP60985 99 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 HCP5Q6MZN7 132 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 PLSCR2Q9NRY7 297 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 S1PR2O95136 353 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 CCL1P22362 96 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 HIST1H3AP68431 136 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 WBP1Q96G27 269 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 SPRR3Q9UBC9 169 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 ACACAQ13085 2346 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 PQLC2LA1A4F0 135 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 KIAA1324LA8MWY0 1029 aaPredicted RBP16.71■□□□□ 0.27
PCDH8-202ENST00000377942 TIMP3P35625 211 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 ZNF273Q14593 569 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 PQLC2Q6ZP29 291 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 BMPERQ8N8U9 685 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 SMIM8Q96KF7 97 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 FBLN5Q9UBX5 448 aa16.71■□□□□ 0.27
PCDH8-202ENST00000377942 C12orf77C9JDV5 145 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 IL18BPO95998 194 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 TAF15Q92804 592 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDH8-202ENST00000377942 RHBDL1O75783 438 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 CXCL2P19875 107 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 RANP62826 216 aaKnown RBP16.7■□□□□ 0.26
PCDH8-202ENST00000377942 ZNF146Q15072 292 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 SNRNP40Q96DI7 357 aaKnown RBP16.7■□□□□ 0.26
PCDH8-202ENST00000377942 METTL26Q96S19 204 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 RALGAPA1Q6GYQ0 2036 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 BMPR1BO00238 502 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 ORM1P02763 201 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 CAMPP49913 170 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 LRRC75BQ2VPJ9 315 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 OR10C1Q96KK4 312 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 WNT5AP41221 380 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 PPOXP50336 477 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 RTN4RL2Q86UN3 420 aa16.7■□□□□ 0.26
PCDH8-202ENST00000377942 BCL2P10415 239 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 RBPMS2Q6ZRY4 209 aaKnown RBP16.69■□□□□ 0.26
PCDH8-202ENST00000377942 OSR1Q8TAX0 266 aaPredicted RBP16.69■□□□□ 0.26
PCDH8-202ENST00000377942 IGKV3-7A0A075B6H7 116 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 PMCHP20382 165 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 RUNX1Q01196 453 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 RNASEKQ6P5S7 137 aaKnown RBP16.69■□□□□ 0.26
PCDH8-202ENST00000377942 LEAP2Q969E1 77 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 RSRP1Q9BUV0 290 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 TLNRD1Q9H1K6 362 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 DPM3Q9P2X0 92 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 RND2P52198 227 aa16.69■□□□□ 0.26
PCDH8-202ENST00000377942 HKR1P10072 659 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 RND3P61587 244 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 BPIFA4PQ86YQ2 179 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 RBM14Q96PK6 669 aaKnown RBP16.68■□□□□ 0.26
PCDH8-202ENST00000377942 MESP1Q9BRJ9 268 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 RD3LP0DJH9 198 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 RNFT1Q5M7Z0 435 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 LINC00052Q96N35 136 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 SSBP3Q9BWW4 388 aaPredicted RBP16.68■□□□□ 0.26
PCDH8-202ENST00000377942 CELA3BP08861 270 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 ZNF735P0CB33 412 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 DLK1P80370 383 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 TBR1Q16650 682 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 NPIPB11E5RHQ5 1161 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 FCER1GP30273 86 aa16.68■□□□□ 0.26
PCDH8-202ENST00000377942 C19orf24Q9BVV8 132 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 KBTBD11-OT1A0A1B0GTJ5 212 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 MST1P26927 711 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 CHAC2Q8WUX2 184 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 OR4C12Q96R67 309 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 C7orf77A4D0Y5 90 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 H3BQ15 152 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 KLK2P20151 261 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 RAB9AP51151 201 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 GGNQ86UU5 652 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 ZIC4Q8N9L1 334 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 RSG1Q9BU20 258 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 LINC00312Q9Y6C7 94 aa16.67■□□□□ 0.26
PCDH8-202ENST00000377942 AMTP48728 403 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 FAM106AQ4KMX7 169 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 FAM216AQ8WUB2 273 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 UFC1Q9Y3C8 167 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 EFNA2O43921 213 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 ZG16O60844 167 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 GALNT14Q96FL9 552 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 LDLRAD3Q86YD5 345 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 FAM216BQ8N7L0 139 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 OR52M1Q8NGK5 317 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 FAM168AQ92567 244 aa16.66■□□□□ 0.26
PCDH8-202ENST00000377942 FABP4P15090 132 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 GTF3AQ92664 365 aaKnown RBP16.65■□□□□ 0.26
PCDH8-202ENST00000377942 PLSCR4Q9NRQ2 329 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 CBLN4Q9NTU7 201 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 MFSD2BA6NFX1 497 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 CLPSP04118 112 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 FXYD3Q14802 87 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 ARTNQ5T4W7 220 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 WFDC3Q8IUB2 231 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 HIST1H1BP16401 226 aaKnown RBP16.65■□□□□ 0.26
PCDH8-202ENST00000377942 GPHA2Q96T91 129 aa16.65■□□□□ 0.26
PCDH8-202ENST00000377942 EBLN2Q6P2I7 272 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms