RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 LRRC75AQ8NAA5 344 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 RALYQ9UKM9 306 aaKnown RBP9.41□□□□□ -0.9
MDC1-201ENST00000376406 DOCK11Q5JSL3 2073 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 GUCA2BQ16661 112 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 NSUN5P2Q63ZY6 315 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 TIMP4Q99727 224 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 TUBD1Q9UJT1 453 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 SPACA3Q8IXA5 215 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 IGKV3D-11A0A0A0MRZ8 115 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 OR5AL1P0C617 328 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 OR5AU1Q8NGC0 362 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
MDC1-201ENST00000376406 A0A0G2JK05 382 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
MDC1-201ENST00000376406 PKIAP61925 76 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 SELENOTP62341 195 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.9
MDC1-201ENST00000376406 ASPHD2Q6ICH7 369 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 ZNF880Q6PDB4 577 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 FAM90A1Q86YD7 464 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 POC1AQ8NBT0 407 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 TXNDC17Q9BRA2 123 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 DLL3Q9NYJ7 618 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 EIF4E3Q8N5X7 224 aaKnown RBP9.4□□□□□ -0.9
MDC1-201ENST00000376406 IMMP1LQ96LU5 166 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 TM2D1Q9BX74 207 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
MDC1-201ENST00000376406 RAXQ9Y2V3 346 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 PF4V1P10720 104 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 ZNF418Q8TF45 676 aaPredicted RBP9.4□□□□□ -0.9
MDC1-201ENST00000376406 FAM222BQ8WU58 562 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 RSG1Q9BU20 258 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 TNFRSF19Q9NS68 423 aa9.4□□□□□ -0.9
MDC1-201ENST00000376406 SPTAN1Q13813 2472 aaKnown RBP9.4□□□□□ -0.9
MDC1-201ENST00000376406 LOC102723996A0A087X1L8 192 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 SIAH2O43255 324 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 RUNX1Q01196 453 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 A0A087X0M5 115 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 A0A1B0GX30 115 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 C9orf172C9J069 976 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 M0QZK8 103 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 GGCTO75223 188 aaKnown RBP9.4□□□□□ -0.91
MDC1-201ENST00000376406 ITLN1Q8WWA0 313 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.91
MDC1-201ENST00000376406 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.91
MDC1-201ENST00000376406 NTN3O00634 580 aaPredicted RBP9.39□□□□□ -0.91
MDC1-201ENST00000376406 SS18L1O75177 396 aaPredicted RBP9.39□□□□□ -0.91
MDC1-201ENST00000376406 FAM106AQ4KMX7 169 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 CXorf66Q5JRM2 361 aaPredicted RBP9.39□□□□□ -0.91
MDC1-201ENST00000376406 ZNF383Q8NA42 475 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 VPS25Q9BRG1 176 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 IL36RNQ9UBH0 155 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 PPIAL4CA0A0B4J2A2 164 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 ZNF253O75346 499 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 DANCRP0C864 163 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 COL8A1P27658 744 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 KLF14Q8TD94 323 aaPredicted RBP9.39□□□□□ -0.91
MDC1-201ENST00000376406 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 NBASA2RRP1 2371 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 SHISA3A0PJX4 238 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 ZNF729A6NN14 1252 aaPredicted RBP9.39□□□□□ -0.91
MDC1-201ENST00000376406 TBX6O95947 436 aaPredicted RBP9.39□□□□□ -0.91
MDC1-201ENST00000376406 OR4C13Q8NGP0 309 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 OR5P3Q8WZ94 311 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 TMEM186Q96B77 213 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 CLEC7AQ9BXN2 247 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 PLXNA2O75051 1894 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 M0R143 59 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 TIAF1O95411 115 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 RTN4RL2Q86UN3 420 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 C5orf17Q8NAS9 161 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 GPR146Q96CH1 333 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 IDI2-AS1Q9NZ38 188 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 TCL1AP56279 114 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 BET1LQ9NYM9 111 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 NUP37Q8NFH4 326 aa9.39□□□□□ -0.91
MDC1-201ENST00000376406 MED12Q93074 2177 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 LRRK1Q38SD2 2015 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 TGFBR3LH3BV60 316 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 BMPR1BO00238 502 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 ZNF818PQ6ZRF7 136 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 FGFRL1Q8N441 504 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 APCDD1LQ8NCL9 501 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 TAF15Q92804 592 aaKnown RBP eCLIP9.38□□□□□ -0.91
MDC1-201ENST00000376406 SNURFLB1AK76 121 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 HIST1H1BP16401 226 aaKnown RBP9.38□□□□□ -0.91
MDC1-201ENST00000376406 IER3P46695 156 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 SLC25A53Q5H9E4 307 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 C11orf42Q8N5U0 333 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
MDC1-201ENST00000376406 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms