RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 BCL3P20749 454 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 CCL11P51671 97 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 VHLLQ6RSH7 139 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 CUL9Q8IWT3 2517 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 ZNF32P17041 273 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 CHRNB4P30926 498 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 TPPP2P59282 170 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 MDS2Q8NDY4 140 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 OR10G9Q8NGN4 311 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 OR10G7Q8NGN6 311 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 SF3B5Q9BWJ5 86 aaKnown RBP10.88□□□□□ -0.67
MSH5-204ENST00000375755 PATZ1Q9HBE1 687 aaKnown RBP10.88□□□□□ -0.67
MSH5-204ENST00000375755 ELOVL5Q9NYP7 299 aa10.88□□□□□ -0.67
MSH5-204ENST00000375755 SVILO95425 2214 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 A0A096LPE4 126 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 CBY3A6NI87 242 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 ZNF114Q8NC26 417 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 ZNF552Q9H707 407 aaPredicted RBP10.87□□□□□ -0.67
MSH5-204ENST00000375755 TMEM38BQ9NVV0 291 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 PGPEP1LA6NFU8 196 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 BMP5P22003 454 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 COMPP49747 757 aaPredicted RBP10.87□□□□□ -0.67
MSH5-204ENST00000375755 RANP62826 216 aaKnown RBP10.87□□□□□ -0.67
MSH5-204ENST00000375755 RBX1P62877 108 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 SRSF7Q16629 238 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■■■□□ 17.5
MSH5-204ENST00000375755 AARDQ4LEZ3 155 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 SGMS2Q8NHU3 365 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 FER1L6-AS2Q96M78 137 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 MSL2Q9HCI7 577 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 TIMM9Q9Y5J7 89 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 ATP23Q9Y6H3 246 aa10.87□□□□□ -0.67
MSH5-204ENST00000375755 KIR2DS1A0A191URI9 304 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 SERF1AO75920 110 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 CRYAAP02489 173 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 KIR2DS4P43632 304 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ZNF324BQ6AW86 544 aaPredicted RBP10.86□□□□□ -0.67
MSH5-204ENST00000375755 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 Q6ZVH6 145 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 LSM10Q969L4 123 aaKnown RBP10.86□□□□□ -0.67
MSH5-204ENST00000375755 DERL1Q9BUN8 251 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ABI3Q9P2A4 366 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ERRFI1Q9UJM3 462 aaPredicted RBP10.86□□□□□ -0.67
MSH5-204ENST00000375755 RNF114Q9Y508 228 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 NBEAQ8NFP9 2946 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ZNF503-AS2A6NEH8 195 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 C11orf94C9JXX5 98 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 HS3ST1O14792 307 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 HNF1AP20823 631 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 GNB1P62873 340 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ARG2P78540 354 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 FOXL1Q12952 345 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 MMDQ15546 238 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 FDCSPQ8NFU4 85 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ZDHHC11Q9H8X9 412 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 MED12LQ86YW9 2145 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 LOC102724200A0A096LPH7 203 aaPredicted RBP10.86□□□□□ -0.67
MSH5-204ENST00000375755 NDUFB8O95169 186 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 CCL2P13500 99 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 S100GP29377 79 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 PSG4Q00888 419 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 FFAR4Q5NUL3 377 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 FOXB1Q99853 325 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 OR2W1Q9Y3N9 320 aa10.86□□□□□ -0.67
MSH5-204ENST00000375755 ZNF816-ZNF321PA0A0X1KG74 233 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 OR6C6A6NF89 314 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 F2Z2F3 143 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 RBFOX2O43251 390 aaKnown RBP eCLIP10.85□□□□□ -0.672e-20■□□□□ 10.6
MSH5-204ENST00000375755 CTXN2P0C2S0 81 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 CD99P14209 185 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 CEACAM8P31997 349 aaPredicted RBP10.85□□□□□ -0.67
MSH5-204ENST00000375755 YPEL3P61236 119 aaPredicted RBP10.85□□□□□ -0.67
MSH5-204ENST00000375755 SELENOTP62341 195 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 STPG4Q8N801 248 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 Q8NFD4 153 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 SPRR3Q9UBC9 169 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 B4GALT7Q9UBV7 327 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 DNPH1O43598 174 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 CBLN1P23435 193 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 SAPCD1Q5SSQ6 148 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 OR5P3Q8WZ94 311 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 FGF23Q9GZV9 251 aaPredicted RBP10.85□□□□□ -0.67
MSH5-204ENST00000375755 RYDENQ9NUL5 291 aaKnown RBP10.85□□□□□ -0.67
MSH5-204ENST00000375755 RNF24Q9Y225 148 aa10.85□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A10PA6NDY2 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A18PA6NE21 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A16PA6NEW6 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A20PA6NIJ5 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A8PA6NJQ4 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A7PA6NKC0 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A22PA8MWA6 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A12PA8MX19 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A5PA8MXJ8 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A23PA8MXZ1 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 TM4SF5O14894 197 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A15PP0C7V4 464 aa10.84□□□□□ -0.67
MSH5-204ENST00000375755 FAM90A13PP0C7W8 464 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms