RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TGIF2-C20orf24A0A0A6YYL0 155 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 FOXI3A8MTJ6 420 aaPredicted RBP12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 PTP4A3O75365 173 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 ISG15P05161 165 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 CTSSP25774 331 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 PGLYRP1O75594 196 aaPredicted RBP12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 TMEM177Q53S58 311 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 TMEM105Q8N8V8 129 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 CHAC2Q8WUX2 184 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 WFDC12Q8WWY7 111 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 MGST3O14880 152 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 BEND2Q8NDZ0 799 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 TRGC2P03986 189 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 CSRP2Q16527 193 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 RPL39P5Q59GN2 51 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 RHOVQ96L33 236 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 VGLL1Q99990 258 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 SSBP3Q9BWW4 388 aaPredicted RBP12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 MIOXQ9UGB7 285 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 IGKV3D-20A0A0C4DH25 116 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 GPR146Q96CH1 333 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 ZFP30Q9Y2G7 519 aa12.62□□□□□ -0.39
NOTCH4-201ENST00000375023 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 APCDD1LQ8NCL9 501 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 PILRBQ9UKJ0 227 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 HIST1H1AQ02539 215 aaPredicted RBP12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 FAM27E3Q08E93 113 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 FAM110DQ8TAY7 271 aaPredicted RBP12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 A6NDN8 102 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 RAG2P55895 527 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 STARD6P59095 220 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 RBM38Q9H0Z9 239 aaKnown RBP12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 DLL3Q9NYJ7 618 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 HS3ST3B1Q9Y662 390 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 GCGP01275 180 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 FUT5Q11128 374 aa12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 VDAC2P45880 294 aaPredicted RBP12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 QTRT1Q9BXR0 403 aaKnown RBP12.61□□□□□ -0.39
NOTCH4-201ENST00000375023 A0A0U1RQV5 110 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 CRYBB3P26998 211 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 MYOFQ9NZM1 2061 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 COX6A1P12074 109 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 Q5PR19 223 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 WNT5BQ9H1J7 359 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 IGHV1-69-2A0A0G2JMI3 117 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 FAM209BQ5JX69 171 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 SIGLEC12Q96PQ1 595 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 LHFPL6Q9Y693 200 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 SHANK3Q9BYB0 1731 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 IGHV3-11P01762 117 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 RELQ04864 619 aaPredicted RBP12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 LURAP1LQ8IV03 231 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 ST6GALNAC3Q8NDV1 305 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 GPR82Q96P67 336 aa12.6□□□□□ -0.39
NOTCH4-201ENST00000375023 TFF1P04155 84 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 CD99P14209 185 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 HOXA6P31267 233 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 TBL2Q9Y4P3 447 aaKnown RBP12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 GRIFINA4D1Z8 144 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 MPDU1O75352 247 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 RFPL3SP0C7P2 107 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 C1orf53Q5VUE5 145 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 SAP25Q8TEE9 199 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 DSPPQ9NZW4 1301 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 A0A1W2PQM1 296 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 ODAMA1E959 279 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 UBE2V2Q15819 145 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 SELENOHQ8IZQ5 122 aaKnown RBP12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 BCL2P10415 239 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 GOLT1AQ6ZVE7 132 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 AHRRA9YTQ3 701 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 H0YL77 283 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 CDS2O95674 445 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 MFAP4P55083 255 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 CALHM1Q8IU99 346 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 GLMPQ8WWB7 406 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 LSM10Q969L4 123 aaKnown RBP12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 C18orf15Q96N68 181 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
NOTCH4-201ENST00000375023 FHITP49789 147 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 SHISA5Q8N114 240 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 OR4C13Q8NGP0 309 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 CEACAM1P13688 526 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 TMEM252Q8N6L7 170 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 ZBTB34Q8NCN2 500 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 DICER1Q9UPY3 1922 aaKnown RBP12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 A0A1W2PS18 150 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms