RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR2A4O95047 310 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 HPRT1P00492 218 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 P0C879 139 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 LPAR6P43657 344 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 LGALS4P56470 323 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 POU2AF1Q16633 256 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 KLF17Q5JT82 389 aaPredicted RBP13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 GPR157Q5UAW9 335 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 LYZL2Q7Z4W2 148 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 UXS1Q8NBZ7 420 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 CFHR4Q92496 578 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 LSM10Q969L4 123 aaKnown RBP13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 MALSU1Q96EH3 234 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 OR2A7Q96R45 310 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 NEURL2Q9BR09 285 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 WASHC3Q9Y3C0 194 aa13.9□□□□□ -0.18
HLA-DMA-201ENST00000374843 A0A1W2PRD5 423 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 A0A1W2PRF3 423 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 A0A1W2PRM7 423 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 ADAP1O75689 374 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 ATG12O94817 140 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 IGKV1-5P01602 117 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 GIPP09681 153 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 IGHV4-38-2P0DP08 117 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 VDAC1P21796 283 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 MC5RP33032 325 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 H2BFSP57053 126 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 BPIFB3P59826 476 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 TMEM177Q53S58 311 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 GGNBP1Q5YKI7 109 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 AKAP14Q86UN6 197 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 SEC22AQ96IW7 307 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 ST6GAL2Q96JF0 529 aa13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 ZNF436Q9C0F3 470 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMA-201ENST00000374843 ZNF469Q96JG9 3925 aaPredicted RBP13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 CCSO14618 274 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 CD5LO43866 347 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 CRYZL1O95825 349 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 HOXB5P09067 269 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 FAM219AQ8IW50 185 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 DYNAPQ8N1N2 210 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 OSR1Q8TAX0 266 aaPredicted RBP13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 C17orf50Q8WW18 174 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 NOTCH2Q04721 2471 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 FLNBO75369 2602 aaKnown RBP13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 MYO9AB2RTY4 2548 aa13.88□□□□□ -0.19
HLA-DMA-201ENST00000374843 TIMM23O14925 209 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 SMAD7O15105 426 aaKnown RBP13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 IFNA21P01568 189 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 IGKV1-16P04430 117 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 SLC25A6P12236 298 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 NQO2P16083 231 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 CD1BP29016 333 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 RUSC1-AS1Q66K80 236 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 GSG1LQ6UXU4 331 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 TCTE3Q8IZS6 198 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 R3HDM4Q96D70 268 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 SPIN2AQ99865 258 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 SPIN2BQ9BPZ2 258 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 ITGB1BP2Q9UKP3 347 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 HILPDAQ9Y5L2 63 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 MMP24Q9Y5R2 645 aa13.87□□□□□ -0.19
HLA-DMA-201ENST00000374843 A0A0G2JRQ6 117 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 MARCH11A6NNE9 402 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 FAM90A9PA6NNJ1 464 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 MPTX1A8MV57 137 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 CCNKO75909 580 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 SIX6O95475 246 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 AKR1C2P52895 323 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 RAP2BP61225 183 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 CD83Q01151 205 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 SSX2Q16385 188 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 SPNS3Q6ZMD2 512 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 C9orf139Q6ZV77 190 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 MOB3BQ86TA1 216 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 TEX29Q8N6K0 151 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 OR4C13Q8NGP0 309 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 OR10C1Q96KK4 312 aa13.86□□□□□ -0.19
HLA-DMA-201ENST00000374843 H7C2Y5 167 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 PFDN1O60925 122 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 VENTXO95231 258 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 HRASP01112 189 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 DYNLT3P51808 116 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 ARHGDIBP52566 201 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 IL15RAQ13261 267 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 FLYWCH2Q96CP2 140 aaKnown RBP13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 RRNAD1Q96FB5 475 aaKnown RBP13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 RNF5Q99942 180 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 AIFM2Q9BRQ8 373 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 NMES1Q9C002 83 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 RANGRFQ9HD47 186 aaPredicted RBP13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 COA4Q9NYJ1 87 aa13.85□□□□□ -0.19
HLA-DMA-201ENST00000374843 IGHV3OR16-10A0A075B7F0 116 aa13.84□□□□□ -0.19
HLA-DMA-201ENST00000374843 IGHV3-72A0A0B4J1Y9 119 aa13.84□□□□□ -0.19
HLA-DMA-201ENST00000374843 A0A1B0GU03 582 aa13.84□□□□□ -0.19
HLA-DMA-201ENST00000374843 C5orf51A6NDU8 294 aa13.84□□□□□ -0.19
HLA-DMA-201ENST00000374843 KRASP01116 189 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms