RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TUBG2Q9NRH3 451 aa3.97□□□□□ -1.77
USP48-202ENST00000374730 CCL28Q9NRJ3 127 aa3.97□□□□□ -1.77
USP48-202ENST00000374730 LYRM2Q9NU23 88 aaPredicted RBP3.97□□□□□ -1.77
USP48-202ENST00000374730 NDRG3Q9UGV2 375 aa3.97□□□□□ -1.77
USP48-202ENST00000374730 IL19Q9UHD0 177 aa3.97□□□□□ -1.77
USP48-202ENST00000374730 KPTNQ9Y664 436 aa3.97□□□□□ -1.77
USP48-202ENST00000374730 DCHS1Q96JQ0 3298 aa3.97□□□□□ -1.77
USP48-202ENST00000374730 A0A1B0GU03 582 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 A0A1B0GWJ7 208 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 IGSF23A1L1A6 192 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 UMAD1C9J7I0 102 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 RNASEK-C17orf49H0YIS7 233 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 K7N7A8 449 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SLC33A1O00400 549 aaPredicted RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 HSD17B6O14756 317 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SIGLEC5O15389 551 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 TXNL1O43396 289 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 PGLYRP1O75594 196 aaPredicted RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 RHBDL1O75783 438 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CEACAM4O75871 244 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR2H2O95918 312 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 IGKV3-15P01624 115 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR8U9P0C7N5 309 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CEACAM1P13688 526 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 DAOP14920 347 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 ZNF44P15621 663 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CBR1P16152 277 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CTRB1P17538 263 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 KITLGP21583 273 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 PAX6P26367 422 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 MC5RP33032 325 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SNCAP37840 140 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CD200P41217 278 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 GPR12P47775 334 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CAMLGP49069 296 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 IDH3GP51553 393 aaPredicted RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 AKR1C2P52895 323 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 POLR2GP62487 172 aaKnown RBP eCLIP3.96□□□□□ -1.78
USP48-202ENST00000374730 PMP22Q01453 160 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 FLI1Q01543 452 aaPredicted RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 AKR1C1Q04828 323 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 GTF3C1Q12789 2109 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 ZNF154Q13106 437 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 MSMO1Q15800 293 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 HFEQ30201 348 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SMUG1Q53HV7 270 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 KIAA2026Q5HYC2 2103 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SPATA46Q5T0L3 261 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CTRB2Q6GPI1 263 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 FAM122CQ6P4D5 195 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 FIP1L1Q6UN15 594 aaKnown RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 C1orf174Q8IYL3 243 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 C17orf78Q8N4C9 275 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 TMEM252Q8N6L7 170 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SCCPDHQ8NBX0 429 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 NEXN-AS1Q8NBZ9 246 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 FDCSPQ8NFU4 85 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR10V1Q8NGI7 309 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR8U1Q8NH10 309 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR10J5Q8NHC4 309 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 PLPPR1Q8TBJ4 325 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SLC25A40Q8TBP6 338 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 RDH5Q92781 318 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 LSM10Q969L4 123 aaKnown RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 SLC25A33Q9BSK2 321 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SCRT1Q9BWW7 348 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR2J1Q9GZK6 312 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 TOLLIPQ9H0E2 274 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 TLNRD1Q9H1K6 362 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 OR51B6Q9H340 312 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SMDT1Q9H4I9 107 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 PLEKHF2Q9H8W4 249 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 C19orf12Q9NSK7 152 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 CACFD1Q9UGQ2 172 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 RNF115Q9Y4L5 304 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 WIPI2Q9Y4P8 454 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 ZNF292O60281 2723 aa3.96□□□□□ -1.78
USP48-202ENST00000374730 SPENQ96T58 3664 aaKnown RBP3.96□□□□□ -1.78
USP48-202ENST00000374730 HEATR1Q9H583 2144 aaKnown RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 USF3Q68DE3 2245 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 DMXL1Q9Y485 3027 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 CELSR3Q9NYQ7 3312 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 DSPP15924 2871 aaKnown RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 ZFHX2Q9C0A1 2572 aaPredicted RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 TMEM30CPA0ZSE6 113 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 BTBD17A6NE02 478 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 FAM24AA6NFZ4 105 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 RNF212BA8MTL3 300 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 FAM90A26D6RGX4 464 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 SIRPB1O00241 398 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 WRBO00258 174 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 HS3ST1O14792 307 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 SH2D1BO14796 132 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 NUPL2O15504 423 aaKnown RBP3.95□□□□□ -1.78
USP48-202ENST00000374730 MLNRO43193 412 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 ZNHIT1O43257 154 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 HSPA12AO43301 675 aa3.95□□□□□ -1.78
USP48-202ENST00000374730 SSSCA1O60232 199 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms