RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PCSK4Q6UW60 755 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 R3HDM4Q96D70 268 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 DYNLRB1Q9NP97 96 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 HEYLQ9NQ87 328 aaPredicted RBP9.07□□□□□ -0.96
CXCL12-203ENST00000374429 CBLN4Q9NTU7 201 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 CHTOPQ9Y3Y2 248 aaKnown RBP9.07□□□□□ -0.96
CXCL12-203ENST00000374429 NAV3Q8IVL0 2385 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 TMEM30CPA0ZSE6 113 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 GPR137BO60478 399 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 LINC00614P0C842 121 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 NAAAQ02083 359 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 WDR82Q6UXN9 313 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 ZNF705AQ6ZN79 300 aaPredicted RBP9.07□□□□□ -0.96
CXCL12-203ENST00000374429 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
CXCL12-203ENST00000374429 ENSAO43768 121 aaKnown RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 ZG16O60844 167 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 NAPSAO96009 420 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 FGF7P21781 194 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 TNFAIP6P98066 277 aaPredicted RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 PRAMEF5Q5TYX0 476 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 INO80CQ6PI98 192 aaPredicted RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 LHFPL4Q7Z7J7 247 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 NRIP2Q9BQI9 281 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 MYOZ1Q9NP98 299 aaPredicted RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 CLCF1Q9UBD9 225 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 MRPS18CQ9Y3D5 142 aaKnown RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 IGHV3-21A0A0B4J1V1 117 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SPINT2O43291 252 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 OR5I1Q13606 314 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SMIM21Q3B7S5 101 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SOHLH1Q5JUK2 328 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SEM1Q6ZVN7 128 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 BARX1Q9HBU1 254 aaPredicted RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SEC14L6B5MCN3 397 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 TNFSF13O75888 250 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 HSPB1P04792 205 aaKnown RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 FAM157CP0CG43 387 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 IRF2P14316 349 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 RPUSD4Q96CM3 377 aaKnown RBP9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SNHG12Q9BXW3 62 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 PLEKHA2Q9HB19 425 aa9.06□□□□□ -0.96
CXCL12-203ENST00000374429 SYNGR2O43760 224 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 IL24Q13007 206 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 GFI1BQ5VTD9 330 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 NCR3LG1Q68D85 454 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 PIP4P1Q86T03 277 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 CXXC4Q9H2H0 198 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 ZNF665Q9H7R5 613 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 FLNCQ14315 2725 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 A0A1W2PPQ1 181 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 C7orf77A4D0Y5 90 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 CA11O75493 328 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 ACTL6BO94805 426 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 AWAT1Q58HT5 328 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 CD177Q8N6Q3 437 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 RNASE8Q8TDE3 154 aaKnown RBP9.05□□□□□ -0.96
CXCL12-203ENST00000374429 SSMEM1Q8WWF3 244 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 BOD1Q96IK1 185 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 PATZ1Q9HBE1 687 aaKnown RBP9.05□□□□□ -0.96
CXCL12-203ENST00000374429 DECR2Q9NUI1 292 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 A8MWP6 167 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 SCAF4O95104 1147 aaKnown RBP9.05□□□□□ -0.96
CXCL12-203ENST00000374429 MMP9P14780 707 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 ECI1P42126 302 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 CDC34P49427 236 aaPredicted RBP9.05□□□□□ -0.96
CXCL12-203ENST00000374429 ARL16Q0P5N6 197 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 KHDC3LQ587J8 217 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 Q6P435 159 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 ABHD12Q8N2K0 398 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 PINX1Q96BK5 328 aaKnown RBP9.05□□□□□ -0.96
CXCL12-203ENST00000374429 C18orf12Q96KH6 178 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 PACRGQ96M98 296 aaPredicted RBP9.05□□□□□ -0.96
CXCL12-203ENST00000374429 TECTBQ96PL2 329 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 MMP26Q9NRE1 261 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 WIPI2Q9Y4P8 454 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 POMT1Q9Y6A1 747 aa9.05□□□□□ -0.96
CXCL12-203ENST00000374429 AQP7O14520 342 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 PGA5P0DJD9 388 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 HLA-GP17693 338 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 MRPS11P82912 194 aaKnown RBP9.04□□□□□ -0.96
CXCL12-203ENST00000374429 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 ZNF324BQ6AW86 544 aaPredicted RBP9.04□□□□□ -0.96
CXCL12-203ENST00000374429 RBMXL3Q8N7X1 1067 aaKnown RBP9.04□□□□□ -0.96
CXCL12-203ENST00000374429 COQ2Q96H96 371 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 NUDT16L1Q9BRJ7 211 aaKnown RBP9.04□□□□□ -0.96
CXCL12-203ENST00000374429 RAXQ9Y2V3 346 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 SS18L1O75177 396 aaPredicted RBP9.04□□□□□ -0.96
CXCL12-203ENST00000374429 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 GCSAMLQ5JQS6 135 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 ACP7Q6ZNF0 438 aa9.04□□□□□ -0.96
CXCL12-203ENST00000374429 NOL4LQ96MY1 436 aaPredicted RBP9.04□□□□□ -0.96
CXCL12-203ENST00000374429 FAM215AQ9Y5M1 114 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms