RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 WNT5BQ9H1J7 359 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 AP5S1Q9NUS5 200 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 PGPA6NDG6 321 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM187Q14656 261 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 SAP25Q8TEE9 199 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 ELOVL1Q9BW60 279 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 DDA1Q9BW61 102 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 CALYQ9NYX4 217 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 RABAC1Q9UI14 185 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 PILRBQ9UKJ0 227 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM229AB2RXF0 380 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 NPIPB9F8W1W9 429 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 K7ERU9 68 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 ZNHIT1O43257 154 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 AGAP20933 346 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 PTGDSP41222 190 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 GPR6P46095 362 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-203ENST00000372407 ECSCRQ19T08 205 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 C1orf185Q5T7R7 199 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 ZNF430Q9H8G1 570 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-203ENST00000372407 IL36RNQ9UBH0 155 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 ZFP30Q9Y2G7 519 aa9.8□□□□□ -0.84
PTPRF-203ENST00000372407 NPBWR2P48146 333 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 OR4A5Q8NH83 315 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 SMIM8Q96KF7 97 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 OR51M1Q9H341 326 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 KIF26BQ2KJY2 2108 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ABCA7Q8IZY2 2146 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 A0A0G2JK05 382 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 A0A1W2PQM1 296 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ZNF207O43670 478 aaKnown RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 C8orf88P0DMB2 117 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 RND2P52198 227 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 VWCEQ96DN2 955 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ATG101Q9BSB4 218 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 TNFRSF19Q9NS68 423 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 CADP27708 2225 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 MPTX1A8MV57 137 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM250H0YL14 139 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ZG16O60844 167 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 RECKO95980 971 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 SSTR5P35346 364 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 KIR2DL2P43627 348 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ID4P47928 161 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 COMPP49747 757 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 RELBQ01201 579 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 PCOLCEQ15113 449 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 PMCHL1Q16048 86 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 KRTCAP3Q53RY4 240 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ABLIM2Q6H8Q1 611 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 HCP5Q6MZN7 132 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 OR4B1Q8NGF8 309 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM45BQ96B21 275 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 TP53RKQ96S44 253 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 CISD1Q9NZ45 108 aaKnown RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 TCF19Q9Y242 345 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 IGHV3-72A0A0B4J1Y9 119 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 PLAUP00749 431 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 MGPP08493 103 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 CDX1P47902 265 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 IZUMO4Q1ZYL8 232 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 C2orf68Q2NKX9 166 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 WDR25Q64LD2 544 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 OPN3Q9H1Y3 402 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-203ENST00000372407 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
PTPRF-203ENST00000372407 NDUFA2O43678 99 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 HTN1P15515 57 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 FHITP49789 147 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 CLDN18P56856 261 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 SPSB4Q96A44 273 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 RARRES2Q99969 163 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 JPT1Q9UK76 154 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 KCNMB2Q9Y691 235 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 CCL21O00585 134 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 ZNF818PQ6ZRF7 136 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 KLF14Q8TD94 323 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-203ENST00000372407 HIST1H2BAQ96A08 127 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 PSMG3Q9BT73 122 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-203ENST00000372407 SFXN3Q9BWM7 321 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 SH3BGRL3Q9H299 93 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 RPRMQ9NS64 109 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 ZDHHC8Q9ULC8 765 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 A0A1W2PR77 199 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 J3QW42 95 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 KBTBD11O94819 623 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 EFEMP2O95967 443 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 CSRP2Q16527 193 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 ZNF738Q8NE65 137 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM171Q8WVE6 324 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 QTRT1Q9BXR0 403 aaKnown RBP9.78□□□□□ -0.84
PTPRF-203ENST00000372407 C17orf51A8MQB3 221 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 NKX2-8O15522 239 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 COX6A1P12074 109 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 TMEM78Q5T7P6 136 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 LINC00518Q8N0U6 118 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 GALNT14Q96FL9 552 aa9.78□□□□□ -0.84
PTPRF-203ENST00000372407 PARLQ9H300 379 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms