RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MYO18BQ8IUG5 2567 aa9.63□□□□□ -0.87
TSPAN1-201ENST00000372003 SOX15O60248 233 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 HLA-HP01893 362 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 IGHV1-2P23083 117 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 RPL23P62829 140 aaKnown RBP9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 CEACAM21Q3KPI0 293 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 KCNIP4Q6PIL6 250 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 TAF15Q92804 592 aaKnown RBP eCLIP9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 LHX4Q969G2 390 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF837Q96EG3 531 aaPredicted RBP9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 OR51I2Q9H344 312 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 CHODLQ9H9P2 273 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 ELOVL5Q9NYP7 299 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 LAMP3Q9UQV4 416 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 HIVEP3Q5T1R4 2406 aa9.62□□□□□ -0.87
TSPAN1-201ENST00000372003 IGKV1-6A0A0C4DH72 117 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 CTXND1A0A1B0GTU2 59 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 C16orf97H3BN30 126 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 TRAPPC2LH3BP13 241 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 MMP7P09237 267 aaPredicted RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 BTF3P20290 206 aaKnown RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 BCL3P20749 454 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 TMEM267Q0VDI3 215 aaPredicted RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 ADIRFQ15847 76 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 CEACAM16Q2WEN9 425 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 TMEM249Q2WGJ8 235 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 FBXL19-AS1Q494R0 122 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 ALKBH2Q6NS38 261 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 FIP1L1Q6UN15 594 aaKnown RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 ZNF66Q6ZN08 573 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 MOB1BQ7L9L4 216 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 DMRTC2Q8IXT2 367 aaPredicted RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 OR5A2Q8NGI9 324 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 OR2T10Q8NGZ9 312 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 OR10J5Q8NHC4 309 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 MRPL30Q8TCC3 161 aaKnown RBP9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 LINC00470Q9BZP3 86 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 RBKSQ9H477 322 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 GPR35Q9HC97 309 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 OR6C3Q9NZP0 311 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 GAB2Q9UQC2 676 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 MED12LQ86YW9 2145 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 DOCK7Q96N67 2140 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 FLNCQ14315 2725 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 TENM4Q6N022 2769 aa9.61□□□□□ -0.87
TSPAN1-201ENST00000372003 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 M0QZK8 103 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 P2RY6Q15077 328 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 PDCD1Q15116 288 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 USF2Q15853 346 aaPredicted RBP9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 ARHGAP21Q5T5U3 1957 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 BHLHA15Q7RTS1 189 aaPredicted RBP9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 ZDHHC23Q8IYP9 409 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 OR10V1Q8NGI7 309 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 LINC01560Q8TB33 94 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 VSIRQ9H7M9 311 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 A0A096LPE4 126 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 A0A1B0GWJ7 208 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 A0A1W2PPZ6 126 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 RNF212BA8MTL3 300 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 PSG2P11465 335 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 B4GALT1P15291 398 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 COL8A1P27658 744 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 ERVFC1-1P60608 527 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 ARF1P84077 181 aaKnown RBP9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 C1orf194Q5T5A4 169 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 BTNL3Q6UXE8 466 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 SSX7Q7RTT5 188 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 C5orf24Q7Z6I8 188 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 HAPLN4Q86UW8 402 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 PSMG3-AS1Q96PY0 264 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 OR4C12Q96R67 309 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 CACNG5Q9UF02 275 aa9.6□□□□□ -0.87
TSPAN1-201ENST00000372003 DIDO1Q9BTC0 2240 aaKnown RBP9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 A0A1W2PR80 420 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 M0R143 59 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 COX5AP20674 150 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 GZMHP20718 246 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 IDH3GP51553 393 aaPredicted RBP9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 FGF8P55075 233 aaPredicted RBP9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 TGFBR3Q03167 851 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 SLC38A11Q08AI6 406 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 ARL16Q0P5N6 197 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 GABRA6Q16445 453 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 C22orf34Q6ZV56 151 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 ZBTB34Q8NCN2 500 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 NEK7Q8TDX7 302 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 R3HDM4Q96D70 268 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 WFIKKN1Q96NZ8 548 aa9.59□□□□□ -0.87
TSPAN1-201ENST00000372003 PARLQ9H300 379 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms