RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.85□□□□□ -0.99
LYSMD1-201ENST00000368908 FOXJ2Q9P0K8 574 aa8.85□□□□□ -0.99
LYSMD1-201ENST00000368908 KCNS2Q9ULS6 477 aa8.85□□□□□ -0.99
LYSMD1-201ENST00000368908 EP300Q09472 2414 aaPredicted RBP8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 LRRC30A6NM36 301 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 DIRC3C9JPN6 131 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 NDUFB8O95169 186 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 CRYAAP02489 173 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 ZNF16P17020 682 aaPredicted RBP8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 CD33P20138 364 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 CBLN1P23435 193 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 ZNF90Q03938 601 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 TRA2AQ13595 282 aaKnown RBP eCLIP8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 COX19Q49B96 90 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 Q8N7P7 452 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 OR1L1Q8NH94 360 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 OR6C1Q96RD1 312 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 TMEM204Q9BSN7 226 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 QTRT1Q9BXR0 403 aaKnown RBP8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 SH2D2AQ9NP31 389 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 WDR83OSQ9Y284 106 aa8.84□□□□□ -0.99
LYSMD1-201ENST00000368908 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 SYNGR1O43759 233 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 SS18L1O75177 396 aaPredicted RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 MT-ND6P03923 174 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 GPX1P07203 203 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 OR5G3P0C626 314 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 IGLC2P0DOY2 106 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 IGLC3P0DOY3 106 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 PLA2G5P39877 138 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 CDKN1BP46527 198 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 SUMO1P63165 101 aaKnown RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 SPATA45Q537H7 98 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 OR10J3Q5JRS4 329 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 SLC23A3Q6PIS1 610 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 MRPL21Q7Z2W9 205 aaKnown RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 LRP11Q86VZ4 500 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 OR1L6Q8NGR2 347 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 IL1F10Q8WWZ1 152 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 SGCZQ96LD1 299 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 PKIBQ9C010 78 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 ODAMA1E959 279 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 FAM166BA8MTA8 275 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 PRSS47A8MTI9 375 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 C9JCJ5 164 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 MPDU1O75352 247 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 CCL3P10147 92 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 EGR1P18146 543 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 RPL19P84098 196 aaKnown RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 MYPOPQ86VE0 399 aaPredicted RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 FAM58AQ8N1B3 248 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 CPEB3Q8NE35 698 aaKnown RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 OR2D3Q8NGH3 330 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 APOBEC3DQ96AK3 386 aaPredicted RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 CRIM1Q9NZV1 1036 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 CLN8Q9UBY8 286 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 LAMTOR2Q9Y2Q5 125 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 RBM7Q9Y580 266 aaKnown RBP8.83□□□□□ -1
LYSMD1-201ENST00000368908 DOCK11Q5JSL3 2073 aa8.83□□□□□ -1
LYSMD1-201ENST00000368908 LOC102723996A0A087X1L8 192 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 OR5B21A6NL26 309 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 RAB29O14966 203 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 ZNF253O75346 499 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 SCRG1O75711 98 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 WISP2O76076 250 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 B3GALT5-AS1P59052 145 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 PCOLCEQ15113 449 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 MMDQ15546 238 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 MORN2Q502X0 79 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 ZNF497Q6ZNH5 498 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 KLHDC1Q8N7A1 406 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 TCTEX1D1Q8N7M0 179 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 STPG4Q8N801 248 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 C11orf52Q96A22 123 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 SFXN3Q9BWM7 321 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 ARRDC1-AS1Q9H2J1 176 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 ZNF552Q9H707 407 aaPredicted RBP8.82□□□□□ -1
LYSMD1-201ENST00000368908 MUC6Q6W4X9 2439 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 ARHGAP21Q5T5U3 1957 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 A8MXE2 369 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 HYPMO75409 117 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 CD1BP29016 333 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 HNRNPA3P51991 378 aaKnown RBP8.82□□□□□ -1
LYSMD1-201ENST00000368908 PTTG1IPP53801 180 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 UBE2G2P60604 165 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 RPEL1Q2QD12 228 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 HLA-DRB5Q30154 266 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 Q6P435 159 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 WDR73Q6P4I2 378 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 OCC1Q8TAD7 63 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 RNASE8Q8TDE3 154 aaKnown RBP8.82□□□□□ -1
LYSMD1-201ENST00000368908 TMEM45BQ96B21 275 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 KCNS1Q96KK3 526 aa8.82□□□□□ -1
LYSMD1-201ENST00000368908 MBNL3Q9NUK0 354 aaKnown RBP8.82□□□□□ -1
LYSMD1-201ENST00000368908 MRPS16Q9Y3D3 137 aaKnown RBP8.82□□□□□ -1
LYSMD1-201ENST00000368908 A0A1W2PPV4 95 aa8.81□□□□□ -1
LYSMD1-201ENST00000368908 PGPEP1LA6NFU8 196 aa8.81□□□□□ -1
LYSMD1-201ENST00000368908 FCN1O00602 326 aa8.81□□□□□ -1
LYSMD1-201ENST00000368908 CCL25O15444 150 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms