RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 GSG1LQ6UXU4 331 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 ZNF818PQ6ZRF7 136 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 OR13A1Q8NGR1 328 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 RRNAD1Q96FB5 475 aaKnown RBP7.19□□□□□ -1.26
TPM3-213ENST00000368545 AKR1E2Q96JD6 320 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 RDH8Q9NYR8 311 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 OR1A1Q9P1Q5 309 aa7.19□□□□□ -1.26
TPM3-213ENST00000368545 SIX6O95475 246 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 WNT2P09544 360 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 MSMO1Q15800 293 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 DCAF12L2Q5VW00 463 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 C11orf71Q6IPW1 123 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 C12orf54Q6X4T0 127 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 LDLRAD3Q86YD5 345 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 TPRX1Q8N7U7 411 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 LRTM2Q8N967 370 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 OR1L1Q8NH94 360 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 ARL11Q969Q4 196 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 NMES1Q9C002 83 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 COMMD9Q9P000 198 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 JPT1Q9UK76 154 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 RBM7Q9Y580 266 aaKnown RBP7.18□□□□□ -1.26
TPM3-213ENST00000368545 ROS1P08922 2347 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 TRGV10A0A0A0MS01 117 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 C5orf51A6NDU8 294 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 C15orf65H3BRN8 121 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 IFNA21P01568 189 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 OR5AC1P0C628 307 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 SSTR5P35346 364 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 CEACAM6P40199 344 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 MRPS11P82912 194 aaKnown RBP7.18□□□□□ -1.26
TPM3-213ENST00000368545 TMEM187Q14656 261 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 KRTAP24-1Q3LI83 254 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 C5orf24Q7Z6I8 188 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 DEFB108BQ8NET1 73 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 CCL13Q99616 98 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 METTL8Q9H825 291 aaKnown RBP7.18□□□□□ -1.26
TPM3-213ENST00000368545 KAAG1Q9UBP8 84 aa7.18□□□□□ -1.26
TPM3-213ENST00000368545 C3orf85A0A1B0GTC6 90 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 DUXBA0A1W2PPF3 345 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 G3V3Q6 166 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 CCSO14618 274 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 HSD17B6O14756 317 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 DANCRP0C864 163 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 C4BPBP20851 252 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 LGI3Q8N145 548 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 ZNF645Q8N7E2 425 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 FAM216BQ8N7L0 139 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 OR2S2Q9NQN1 319 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 CCL28Q9NRJ3 127 aa7.17□□□□□ -1.26
TPM3-213ENST00000368545 SCO2A0A1W2PP80 73 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 hADV38S2A0JD32 116 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 ZNF729A6NN14 1252 aaPredicted RBP7.16□□□□□ -1.26
TPM3-213ENST00000368545 LINC00473A8K010 186 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 HMSDA8MTL9 139 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 H0Y980 276 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 PET100P0DJ07 73 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 EGR2P11161 476 aaPredicted RBP7.16□□□□□ -1.26
TPM3-213ENST00000368545 MEF2CQ06413 473 aaPredicted RBP7.16□□□□□ -1.26
TPM3-213ENST00000368545 LRRC10Q5BKY1 277 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 DHRS7BQ6IAN0 325 aaPredicted RBP7.16□□□□□ -1.26
TPM3-213ENST00000368545 C9orf62Q8N4C0 152 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 OR11H4Q8NGC9 324 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 GLYATL2Q8WU03 294 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 MSI2Q96DH6 328 aaKnown RBP7.16□□□□□ -1.26
TPM3-213ENST00000368545 TMEM222Q9H0R3 208 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 CALYQ9NYX4 217 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 KCNS2Q9ULS6 477 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 HSPB11Q9Y547 144 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 LINC00312Q9Y6C7 94 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 C13orf42A0A1B0GVH6 325 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 TNFRSF13BO14836 293 aaPredicted RBP7.16□□□□□ -1.26
TPM3-213ENST00000368545 NDUFB3O43676 98 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 YPEL1O60688 119 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 ADAP1O75689 374 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 F2RP25116 425 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 UBALD1Q8TB05 177 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 PPP1R1CQ8WVI7 109 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 IL22RA2Q969J5 263 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 C2orf50Q96LR7 162 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 YPEL2Q96QA6 119 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 TP53RKQ96S44 253 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 SPXQ9BT56 116 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 GAL3ST2Q9H3Q3 398 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 TAS2R3Q9NYW6 316 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 TMED3Q9Y3Q3 217 aa7.16□□□□□ -1.26
TPM3-213ENST00000368545 KBTBD11-OT1A0A1B0GTJ5 212 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 A0A1B0GW55 424 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 ITGB1BP1O14713 200 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 PGLYRP1O75594 196 aaPredicted RBP7.15□□□□□ -1.26
TPM3-213ENST00000368545 SOD3P08294 240 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 OR8U9P0C7N5 309 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 DUX4L2P0CJ85 424 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 DUX4L3P0CJ86 424 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 DUX4L4P0CJ87 422 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 DUX4L5P0CJ88 424 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 DUX4L6P0CJ89 424 aa7.15□□□□□ -1.26
TPM3-213ENST00000368545 DUX4L7P0CJ90 424 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms