RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 OR8J1Q8NGP2 316 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 MARC2Q969Z3 335 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 ORAI1Q96D31 301 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 Q96M66 194 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 SELENOIQ9C0D9 397 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 C5orf66Q9H5L9 145 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 OR1A1Q9P1Q5 309 aa10.65□□□□□ -0.7
VAMP4-202ENST00000367740 FKBP6O75344 327 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 MGMTP16455 207 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 ADMP35318 185 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 SOHLH1Q5JUK2 328 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 TTC9CQ8N5M4 171 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 ACBD7Q8N6N7 88 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 Q8NAQ8 132 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 SETD9Q8NE22 299 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 MRPL27Q9P0M9 148 aaKnown RBP10.64□□□□□ -0.71
VAMP4-202ENST00000367740 S4R3C0 116 aa10.64□□□□□ -0.71
VAMP4-202ENST00000367740 AQP12BA6NM10 295 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 CD2P06729 351 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 HOXB6P17509 224 aaKnown RBP10.63□□□□□ -0.71
VAMP4-202ENST00000367740 POLR2IP36954 125 aaKnown RBP10.63□□□□□ -0.71
VAMP4-202ENST00000367740 MED21Q13503 144 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 PRSS8Q16651 343 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 KDM4DQ6B0I6 523 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 GLIPR1L1Q6UWM5 242 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 Q6ZRM9 215 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 AQP12AQ8IXF9 295 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 SYS1Q8N2H4 156 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 EDARADDQ8WWZ3 215 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 MUL1Q969V5 352 aa10.63□□□□□ -0.71
VAMP4-202ENST00000367740 M0R1X1 148 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 SHOXO15266 292 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 GLT8D1Q68CQ7 371 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 ZNF880Q6PDB4 577 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 IDO2Q6ZQW0 420 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 LHFPL3Q86UP9 236 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 GPR148Q8TDV2 347 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 ACOT12Q8WYK0 555 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 KRTAP4-8Q9BYQ9 185 aa10.62□□□□□ -0.71
VAMP4-202ENST00000367740 C6orf62Q9GZU0 229 aaPredicted RBP10.62□□□□□ -0.71
VAMP4-202ENST00000367740 RPL36Q9Y3U8 105 aaKnown RBP10.62□□□□□ -0.71
VAMP4-202ENST00000367740 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 OR4C46A6NHA9 309 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
VAMP4-202ENST00000367740 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 IGFBP3P17936 291 aaPredicted RBP10.61□□□□□ -0.71
VAMP4-202ENST00000367740 GALP22466 123 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 CEACAM6P40199 344 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 TNP2Q05952 138 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 C10orf55Q5SWW7 151 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 C1orf134Q5TEV5 83 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 PTX4Q96A99 478 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 ZNF221Q9UK13 617 aa10.61□□□□□ -0.71
VAMP4-202ENST00000367740 IGHV4-28A0A0C4DH34 117 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 B2RBV5 119 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 CRTAPO75718 401 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-202ENST00000367740 NAPSAO96009 420 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-202ENST00000367740 CD74P04233 296 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 GTF2A1P52655 376 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-202ENST00000367740 ELLP55199 621 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-202ENST00000367740 UBE2KP61086 200 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 TMEM187Q14656 261 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 AWAT2Q6E213 333 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 TEX45Q8NA69 505 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 MRPL48Q96GC5 212 aaKnown RBP10.6□□□□□ -0.71
VAMP4-202ENST00000367740 CIB1Q99828 191 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 SPIN2AQ99865 258 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 SPIN2BQ9BPZ2 258 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 CHRDL1Q9BU40 450 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 SCRT1Q9BWW7 348 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 EXOGQ9Y2C4 368 aaKnown RBP10.6□□□□□ -0.71
VAMP4-202ENST00000367740 ZNF257Q9Y2Q1 563 aa10.6□□□□□ -0.71
VAMP4-202ENST00000367740 SRRM2Q9UQ35 2752 aaKnown RBP10.59□□□□□ -0.71
VAMP4-202ENST00000367740 ZBTB25P24278 435 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 MRPL28Q13084 256 aaKnown RBP10.59□□□□□ -0.71
VAMP4-202ENST00000367740 VMA21Q3ZAQ7 101 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 CEACAM19Q7Z692 300 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 JAGN1Q8N5M9 183 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 SETD6Q8TBK2 473 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 LGALS12Q96DT0 336 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 FANCD2OSQ96PS1 177 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 FAAP24Q9BTP7 215 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 NDUFAF3Q9BU61 184 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 ZNF430Q9H8G1 570 aaPredicted RBP10.59□□□□□ -0.71
VAMP4-202ENST00000367740 UFC1Q9Y3C8 167 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 FAT1Q14517 4588 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 AGRNO00468 2067 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 VPS13BQ7Z7G8 4022 aa10.59□□□□□ -0.71
VAMP4-202ENST00000367740 TRAV8-7A0A075B6U6 113 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 DEFB131BA0A096LNP1 70 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 HMX3A6NHT5 357 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 TEX22C9J3V5 150 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 MYOD1P15172 320 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 GBX2P52951 348 aaPredicted RBP10.58□□□□□ -0.72
VAMP4-202ENST00000367740 XAF1Q6GPH4 301 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms