RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 RTN4IP1Q8WWV3 396 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 WFDC12Q8WWY7 111 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 MAFIPQ8WZ33 124 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 PIGCQ92535 297 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RGP1Q92546 391 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 SPSB1Q96BD6 273 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ADAT3Q96EY9 351 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RRNAD1Q96FB5 475 aaKnown RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 BORCS8Q96FH0 119 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ARHGAP5-AS1Q96IT6 56 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ABHD14BQ96IU4 210 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 AKR1E2Q96JD6 320 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 BTF3L4Q96K17 158 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 FAM71F1Q96KD3 344 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 SMIM8Q96KF7 97 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CXorf58Q96LI9 332 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ZNF488Q96MN9 340 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 LINC00052Q96N35 136 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 AQP10Q96PS8 301 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RAB40CQ96S21 281 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CLCC1Q96S66 551 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 AMELYQ99218 206 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 SPIN2AQ99865 258 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 SSX3Q99909 188 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ASCL2Q99929 193 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CITED1Q99966 193 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 SPIN2BQ9BPZ2 258 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CMSS1Q9BQ75 279 aaKnown RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ZNF2Q9BSG1 426 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 TMEM59Q9BXS4 323 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 PECRQ9BY49 303 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CTDSP1Q9GZU7 261 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 TOLLIPQ9H0E2 274 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 LPAR5Q9H1C0 372 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 TLNRD1Q9H1K6 362 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 WDR13Q9H1Z4 485 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 TMPRSS5Q9H3S3 457 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 BANF2Q9H503 90 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 IFT22Q9H7X7 185 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ZNF286AQ9HBT8 521 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 SLC39A9Q9NUM3 307 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 FAM206AQ9NX38 181 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 EHFQ9NZC4 300 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RCC2Q9P258 522 aaKnown RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ZNF319Q9P2F9 582 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RNF7Q9UBF6 113 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 MIOXQ9UGB7 285 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 IL19Q9UHD0 177 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ZNF230Q9UIE0 474 aaPredicted RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RNF150Q9ULK6 438 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 ST3GAL6Q9Y274 331 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 VSIG4Q9Y279 399 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 CARHSP1Q9Y2V2 147 aaKnown RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 FBXO7Q9Y3I1 522 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 RBM7Q9Y580 266 aaKnown RBP1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 LHFPL6Q9Y693 200 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 TENM3Q9P273 2699 aa1.26□□□□□ -2.21
RNU1-42P-201ENST00000364033 DOCK11Q5JSL3 2073 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 TRAV14DV4A0A0A6YYC5 116 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 TRAV1-1A0A0B4J248 108 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 TRAV38-1A0A0B4J264 116 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 DUXBA0A1W2PPF3 345 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 RPS10-NUDT3A0A1W2PQS6 291 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 WI2-2373I1.2A0A1W2PRP0 233 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 OOEPA6NGQ2 149 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 CRYM-AS1A6NIL9 109 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 ZNF98A6NK75 572 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 FAM74A7A6NL05 159 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 COLCA2A8K830 154 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 IQCF6A8MYZ5 107 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 PRR32B1ATL7 298 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 SEC14L6B5MCN3 397 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 CLDN34H7C241 214 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 M0R135 149 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 AP4M1O00189 453 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 GPR31O00270 319 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 TIMM23O14925 209 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 AGPAT2O15120 278 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 NPFFO15130 113 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 XRCC2O43543 280 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 NDUFB3O43676 98 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 NDUFA2O43678 99 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 GATCO43716 136 aaKnown RBP1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 ENSAO43768 121 aaKnown RBP1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 ANGPTL7O43827 346 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 SSX5O60225 188 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 SOX15O60248 233 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 PDCD6O75340 191 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 DEDDO75618 318 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 ADAP1O75689 374 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 DHRS3O75911 302 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 SCAF4O95104 1147 aaKnown RBP1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 SCGB1D2O95969 90 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 LHBP01229 141 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 IFNA1P01562 189 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 IFNA10P01566 189 aa1.25□□□□□ -2.21
RNU1-42P-201ENST00000364033 IGHV3-7P01780 117 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms