RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 EMX1Q04741 257 aaPredicted RBP1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 RSU1Q15404 277 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 IMPG1Q17R60 797 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 OR10K2Q6IF99 312 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 ZNF550Q7Z398 422 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 SPATA12Q7Z6I5 190 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 KRTAP13-1Q8IUC0 172 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 DAND5Q8N907 189 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 CLDND2Q8NHS1 167 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 CCL13Q99616 98 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 HRASLSQ9HDD0 168 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 DICER1Q9UPY3 1922 aaKnown RBP1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 ZNF638Q14966 1978 aaKnown RBP1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 NAV1Q8NEY1 1877 aa1.65□□□□□ -2.15
RNU6-28P-201ENST00000362378 A0A087WUU8 490 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 KNCNA6PVL3 124 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 EVPLLA8MZ36 301 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 C9JCJ5 164 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 ZNF878C9JN71 531 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 TRAPPC3O43617 180 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 CALB1P05937 261 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 CSRP1P21291 193 aaKnown RBP1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 CCL1P22362 96 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 CCR7P32248 378 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 XCL1P47992 114 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 REG1BP48304 166 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 CDK9P50750 372 aaKnown RBP1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 TAS2R30P59541 319 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 SS18Q15532 418 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 BATFQ16520 125 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 SAPCD1Q5SSQ6 148 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 LPCAT4Q643R3 524 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 SFXN4Q6P4A7 337 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 C5orf46Q6UWT4 87 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 GPHB5Q86YW7 130 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 GID4Q8IVV7 300 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 OR8J2Q8NGG1 315 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 OR2T27Q8NH04 317 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 RPS4Y2Q8TD47 263 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 ASB17Q8WXJ9 295 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 GNPNAT1Q96EK6 184 aaPredicted RBP1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 MRPS26Q9BYN8 205 aaKnown RBP1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 TMEM222Q9H0R3 208 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 XPNPEP1Q9NQW7 623 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 ANAPC10Q9UM13 185 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 GUCA1BQ9UMX6 200 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 MMACHCQ9Y4U1 282 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 FAM215AQ9Y5M1 114 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 V9GYY5 206 aaPredicted RBP1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 CHD5Q8TDI0 1954 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 NLRC5Q86WI3 1866 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 EVC2Q86UK5 1308 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 REREQ9P2R6 1566 aa1.64□□□□□ -2.15
RNU6-28P-201ENST00000362378 ABCC12Q96J65 1359 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 A0A1B0GW54 56 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 M0R036 132 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 COX7A2LO14548 114 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 GNRH2O43555 120 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 UCHL3P15374 230 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 CD24P25063 80 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 RPL27AP46776 148 aaKnown RBP1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 GABRA2P47869 451 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 ZNF140P52738 457 aaPredicted RBP1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 RAB5BP61020 215 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 CCDC122Q5T0U0 273 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 UMODL1-AS1Q8N2C9 162 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 PHOSPHO2Q8TCD6 241 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 SMCR5Q8TEV8 140 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 C12orf43Q96C57 262 aaKnown RBP1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 SFRP2Q96HF1 295 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 DNAJC30Q96LL9 226 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 STACQ99469 402 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 MIEN1Q9BRT3 115 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 OR51I1Q9H343 314 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 FKBP14Q9NWM8 211 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 UBAP1Q9NZ09 502 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 COQ4Q9Y3A0 265 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 ADAMTS7Q9UKP4 1686 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 MYO16Q9Y6X6 1858 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 SNAPC4Q5SXM2 1469 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 PLB1Q6P1J6 1458 aa1.63□□□□□ -2.15
RNU6-28P-201ENST00000362378 TRGV4A0A0C4DH28 118 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 MDFIC2A0A1B0GVS7 189 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 C11orf86A6NJI1 115 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 SMIM23A6NLE4 172 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 NPYP01303 97 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 ZNF728P0DKX0 622 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 MARCKSL1P49006 195 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 MYL6P60660 151 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 TNFAIP6P98066 277 aaPredicted RBP1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 PRDX4Q13162 271 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 HIST3H3Q16695 136 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 RGS21Q2M5E4 152 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 LRRC75BQ2VPJ9 315 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 ACSM3Q53FZ2 586 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 HIST2H3AQ71DI3 136 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 DCXRQ7Z4W1 244 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 DEFB125Q8N687 156 aa1.62□□□□□ -2.15
RNU6-28P-201ENST00000362378 OR1M1Q8NGA1 313 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms